Gene Rmet_0719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0719 
Symbol 
ID4037510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp796526 
End bp797884 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content64% 
IMG OID637976095 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_582874 
Protein GI94309664 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0128] 5-enolpyruvylshikimate-3-phosphate synthase 
TIGRFAM ID[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCAG CGCGCGCGGC GCGCAACGGC CATGCTGCAG AAAACATGGA ACAACTGACC 
CTCGGCCCCC TGACCCGTGC TTCCGGCACG GTGCGCCTGC CCGGCTCCAA GAGCATCTCC
AACCGCGTGC TGCTGCTGTC CGCGCTCGCC ACCGGCGAAA CGCGCGTCCG CGACCTGCTC
GATTCCGACG ACACGCGTGT CATGCTCGAA GCGCTCAAGG TGCTCGGCGT GGCATGGCGG
CGCGAGGGCA ACGACTGCAT CGTGTCCGGC GTGGGCGGAA ATTTCCCGAG CAAGGCGGCA
GACCTGTTCA TGGGTAATGC CGGCACGGCA ATCCGGCCAT TGACCGCGGC ACTGGCGCTG
CAAGGCGGTA CGTACAAGCT GAGCGGCGTG CAGCGGATGC ATGAACGGCC GATCGGCGAT
CTGGTCGATG GCCTGCGGCA GGTCGGCGCA TCGGTGGATT ACCTGGGCAC GCCCGGCTAC
CCGCCTTTGC AGATCAACCC AGCGCAGATT CGCATTGATG CACCGATCCG TGTGCGCGGC
GATGTATCGA GCCAGTTCCT GACCGCGCTG TTGATGACGT TGCCAATGGC CCAGGCACAA
TCGGGTCGCA TTGAGATCGA AGTGGTCGGC GAATTGATTT CGAAGCCGTA TATCGAGATC
ACGCTGAACT TGCTGTCGCG CTTCGGTATT GCCGTCGAGA GACAGGGCTG GGAGCGCTTT
ATCCTGCCGG CCGGCGCGCG GTACCGTTCG CCGGGCGAGA TCTACGTCGA AGGCGATGCG
TCCACGGCAT CGTACTTCCT GGCGGCGGGC GCCATCGGTG GTGGCCCGGT ACGCGTGGAG
GGTGTGGGCA TGGCGAGTAT CCAGGGCGAT GTTCGGTTTG CCGATGCGCT GAACCGGATG
GGCGCCAACG TGATGGCTGG TGACAACTGG ATTGAAGTGC GCGGCACAGA GCGTGACGAC
GGCCGACTCA ACGGCATCGA GCTCGACTGC AATCACATTC CTGATGCGGC GATGACGCTG
GCCGTGGCCG CGCTGTTCGC GGAGGGCACC ACCACGCTGA CCAACATCGC CAGCTGGCGG
GTCAAGGAAA CGGACCGCAT CTCAGCGATG GCGACGGAGC TGCGCAAGCT CGGCGCGGAG
GTGGAGGAGG GGGCTGATTA CCTGAAAGTG ACGCCGCCGA CCTCCCCGGC AACGTGGCAG
ACCCCGGATG CTGGAATTGG CACCTATGAT GACCATCGGA TGGCCATGTG TTTCTCGTTG
GCCGCATTCG GCCCGTTGCC CGTGAAGATC AACGACCCCG GCTGCGTGGC AAAGACGTTC
CCCGAGTACT TCGAGGTATT TGCCGGAGTG GCGCGGTAA
 
Protein sequence
MPPARAARNG HAAENMEQLT LGPLTRASGT VRLPGSKSIS NRVLLLSALA TGETRVRDLL 
DSDDTRVMLE ALKVLGVAWR REGNDCIVSG VGGNFPSKAA DLFMGNAGTA IRPLTAALAL
QGGTYKLSGV QRMHERPIGD LVDGLRQVGA SVDYLGTPGY PPLQINPAQI RIDAPIRVRG
DVSSQFLTAL LMTLPMAQAQ SGRIEIEVVG ELISKPYIEI TLNLLSRFGI AVERQGWERF
ILPAGARYRS PGEIYVEGDA STASYFLAAG AIGGGPVRVE GVGMASIQGD VRFADALNRM
GANVMAGDNW IEVRGTERDD GRLNGIELDC NHIPDAAMTL AVAALFAEGT TTLTNIASWR
VKETDRISAM ATELRKLGAE VEEGADYLKV TPPTSPATWQ TPDAGIGTYD DHRMAMCFSL
AAFGPLPVKI NDPGCVAKTF PEYFEVFAGV AR