Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0716 |
Symbol | |
ID | 4037507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 793301 |
End bp | 794464 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637976092 |
Product | prephenate dehydratase / chorismate mutase |
Protein accession | YP_582871 |
Protein GI | 94309661 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase [COG1605] Chorismate mutase |
TIGRFAM ID | [TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGAGC AAGACAAGTC CCCCGCCGCC GATGCCCCCG CACAGGAAGC CGGGCGCCAG GACGCTCCTG GACCCAGCGC GCAGGAGCAG GCGTTGTCGG CCGATCTGGC GCCGTTGCGC ACCCAGATCG ACACCGTCGA CCGTGAACTG CTGGCGCTGC TCAATCGTCG CGCCCAGCTC GCCCTCGACG TGGGCGAGGT CAAGAAGAAG TACGGCGCCC CGGTATTTCG TCCCGAACGC GAGTTGCAGG TGATCCGCAA GGTGCAGGGC GCCAATCCCG GACCGCTGCT CGACGAAAGC GTGGCATCGA TTTGGCGCGA GGTGATGTCC GCGTGCCGCG GCCTGGAAAA GCCGCTCGAG ATCGCCTTCC TGGGCCCGGC CGGAACGTTC TCCGAGCAGG CGCTCTACGC GCACTTCGGC CACGAGGTGA CGGGCGTGCC GTGCCCCAGC ATTGACGAGG TGTTCCGTGC CGTGGAGGCT GGTACCGTCG AGTACGGCGT GGTGCCGGTA GAGAACTCGA CTGAGGGCGC GGTGTCGCGC ACGCTCGATC TGTTCCTGCA GACGTCGCTC AAGATCAGCG GCGAGATCGC GCTGAAGGTC CACCACAATC TCATGGCTTC CACGCCGGAC ATGAAGGGTG TGACCGTCGT GCGTGCCCAT GCGCAGGCGC TGGCGCAGTG CCAGAACTGG CTGTCCGCGA ACTATCCGCA TCTGGAGCGC CAGGCCGTGT CCAGCAATGC CGAAGCCGCA CGCATGGCCA GTGAGGACCC TACCGTTGCG GCGATTGCCG GTGAAACGGC GGCCAATCGC TATCACCTGC ACATTATCCG TTCGCACATC CAGGACGATC CGCACAATCG CACCCGTTTC GCGGTGATCG GCCGCTATGA GACGGAGCCT TCTGGCAGCG ATCAGACCTC GTTGATCCTG TCGGTGCCGA ACAAGGCGGG CGCCGTGTAT CAACTGCTGG CACCACTGGC CGAGAACGGC GTATCGATGT GCAGGTTTGA ATCGCGCCCG GCGCGCAGTG GCGCGTGGGA ATACTACTTC TACGTGGATG TGGAAGGCCA TCAGCATGAA CCGGCCGTGA CGCGCGCGAT CGAGATGCTG CGTCGCAATG CCGCGTACCT GAAGGTCCTG GGTTCGTATC CATCCAGCAA ATAA
|
Protein sequence | MTEQDKSPAA DAPAQEAGRQ DAPGPSAQEQ ALSADLAPLR TQIDTVDREL LALLNRRAQL ALDVGEVKKK YGAPVFRPER ELQVIRKVQG ANPGPLLDES VASIWREVMS ACRGLEKPLE IAFLGPAGTF SEQALYAHFG HEVTGVPCPS IDEVFRAVEA GTVEYGVVPV ENSTEGAVSR TLDLFLQTSL KISGEIALKV HHNLMASTPD MKGVTVVRAH AQALAQCQNW LSANYPHLER QAVSSNAEAA RMASEDPTVA AIAGETAANR YHLHIIRSHI QDDPHNRTRF AVIGRYETEP SGSDQTSLIL SVPNKAGAVY QLLAPLAENG VSMCRFESRP ARSGAWEYYF YVDVEGHQHE PAVTRAIEML RRNAAYLKVL GSYPSSK
|
| |