| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0700 |
|---|
| Symbol | |
|---|
| ID | 4037490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 772476 |
|---|
| End bp | 773753 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637976076 |
|---|
| Product | D-amino acid dehydrogenase small subunit |
|---|
| Protein accession | YP_582855 |
|---|
| Protein GI | 94309645 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATAG CGATCGTGGG TGCCGGTGTG GTCGGCATGA CCTCCGCGTG GCGGTTGGCC
AACGATGGTC ACGAAGTCAC CGTGGTCGAG CGCCATGATG GTCCGGGCGA GGAAACCAGC
TTCGCCAACG GCGGCCAGCT CAGCTACAGC TATGTGGCGC CGCTGGCCGG ACCGGGCGTG
TTGTCGAAGG TGCCGGGCTG GCTGCTGGAT CGCGATTCAC CGATGCGCTT CCGGCCATCC
ATGGACCCGT CGCAATGGCG CTGGCTGCTG GCTTTCGCTC GGGCGTGCAA TGCATCGGCA
AGCGAGGCCG CCACGCGCAA GCTGCTGCGC CTGTCGTTCT ACTCGCGCGA TCTGATGCAG
GCTTTCGTCG ATCGTCCGGA CGCGCGGCAG GAGGGCGGTG GTTTCGATTT CGCGCGTAGC
GGCAAGCTGA TCGTGCACCG TGATGCGGCG GCCTACGAAT CGGCCTGCCG CCTGCTCGAC
TATCAGGCCA GCCTTGGTTG CGAACAGCAG GCATTGGATC GCGATGCCAC GGTTGCGCTG
GAGCCGGCGT TGGCCGGCAT TCGGCAGGGC ATCGTCGGTG CGATCCACAC GCCGAGCGAG
GAAGTGGGCG ATTGCCATCG CTTCTGCGTG TCACTGGCCC ATCTGTTGCA AGGCAGGCCG
GGTGTCACGC TGCGCTTCGG CACGCGTGTG ACCGGACTGG TGCGCGCGGG GGATCGCGTG
ACGGGCCTGC GCACCGATGC GGGTGATATC CGCGCCGATG CGGTGATTGT GTCGGGCGGC
ATCGGCAGCG TGCCGTTGCT CAAGCCGCTC GGTGTGCGGC CGATGCTGTG GCCGCTGAAG
GGGTACAGCA TCACGGTGCC GATCAGGCAG GGCGTGCTGG CGCCACGTAT CAGCGTGACG
GACTTCGCCA ACAAGATCGT CTATGCGCGC ATCGGCGATA CGCTGCGCGT GGCGGGGATG
GCGGATATCG TGCGCGGCGG CGTGGTGATC GACCGCGAGC GCGCGCAGAC GCTGGTCACG
CAGACGCGTG CGGTGTTTGG CGACGTGAGC CATGGCGCGG ACCTTGATGC ATTGCAGCCG
TGGGCCGGCC TGCGTCCGGC CACGCCCACG GGTTTGCCGA TGATCGGCGA ATCACGCATT
CGCGGTCTGT GGCTGAACCT TGGCCACGGC GCGCTGGGTT TCACGCTGGC CATGGGCAGC
GCGGGTGTGC TGGCCGATCG GATGGCTGGC CGCAAGCCGG TGGTGGATGC CGAAGATTTC
AGTGCAGCGC TCGCATAG
|
|---|
| Protein sequence | MRIAIVGAGV VGMTSAWRLA NDGHEVTVVE RHDGPGEETS FANGGQLSYS YVAPLAGPGV
LSKVPGWLLD RDSPMRFRPS MDPSQWRWLL AFARACNASA SEAATRKLLR LSFYSRDLMQ
AFVDRPDARQ EGGGFDFARS GKLIVHRDAA AYESACRLLD YQASLGCEQQ ALDRDATVAL
EPALAGIRQG IVGAIHTPSE EVGDCHRFCV SLAHLLQGRP GVTLRFGTRV TGLVRAGDRV
TGLRTDAGDI RADAVIVSGG IGSVPLLKPL GVRPMLWPLK GYSITVPIRQ GVLAPRISVT
DFANKIVYAR IGDTLRVAGM ADIVRGGVVI DRERAQTLVT QTRAVFGDVS HGADLDALQP
WAGLRPATPT GLPMIGESRI RGLWLNLGHG ALGFTLAMGS AGVLADRMAG RKPVVDAEDF
SAALA
|
|---|
| |