Gene Rmet_0697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0697 
Symbol 
ID4037487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp769207 
End bp769671 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content56% 
IMG OID637976073 
Productpilus assembly protein major pilin PilA 
Protein accessionYP_582852 
Protein GI94309642 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4969] Tfp pilus assembly protein, major pilin PilA 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG CACGGATGGG AATCCGACGG GTACAGAAGG GCTTTACGCT GATCGAACTG 
ATGATCGTGG TCGCGATCAT CGGTATCTTG GCGGCTATCG CTATTCCGGC GTATCAGGAT
TATGTGGCGA AGTCGAAGGC AGCTTCCGCC TACGCCGATA TCGCTGCCGG TAAGACGGCG
TATGAACTGA TGGTAGTGAA CCCGGATAAC GGTACGCCTA CCTTTACGCC TGCTGGAATT
GGTCTGCAGA TCGCGACTGG CAACTGCTCC GCGATTGCGG TGGCTGCTCC GGACAATACG
GGTGCCGCGA CAAATGCAAT TCAGTGCACG ATCGCCGCCC CGGGTCGTCT TGGAACTGCA
CCGGTTTCTA TCCAGTTCAA TCGTTTGGCA ACCGGTCTGT ACACTTGCAC TACGACGGGC
ATCACGAATA CGAGCTTCAT TCCGACGGGT TGCGTCGCAG GTTGA
 
Protein sequence
MKKARMGIRR VQKGFTLIEL MIVVAIIGIL AAIAIPAYQD YVAKSKAASA YADIAAGKTA 
YELMVVNPDN GTPTFTPAGI GLQIATGNCS AIAVAAPDNT GAATNAIQCT IAAPGRLGTA
PVSIQFNRLA TGLYTCTTTG ITNTSFIPTG CVAG