Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0683 |
Symbol | |
ID | 4037472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 755491 |
End bp | 756165 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637976058 |
Product | Smr protein/MutS2 |
Protein accession | YP_582838 |
Protein GI | 94309628 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00169527 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.676514 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCACG GCGCCAAACC CACCTCCAAG CCCCCCCACC GCATGGGCCT GCACGATCTG GCCACGGTCC GCGACGGCCT CAAGGCCGAC GCCGAGCGCC GCGAAGCCGA ACGGCAAGCC GCCGAGGCCG CCGCCAGGCG CGCCGAGGAA GAAGCCAACG TGTTCCGCAC CAGCATCGGG CAGGTCAGCA ACCTGCGCGA CCGCAACCGC GTCGAGCATC CCGTGAAGAA GCCGAACCCG GAGCCGGTGC AAACCCGTCT CAACGACAAG GCCGTGCTCG AGGCGTCGCT GTCCGATGAA TTCGATGTCG AGAACCTGCT CGATGTCGAC GAGACGATGT CGTTCCGGCG TCCCGGCATC GGCGAGGACG TCATCAAGAA GCTGCGTCGC GGCGAATGGG TGCCGCAGGA CAAGGTCGAC CTGCACGGCC TGCGCTCCGA CGAGGCCCGC GAGGCGCTGG CCAACTTTCT CCGCCGATCG GTGCGCAATG GCGTGCGATG CGTGCGCGTG ATTCACGGCA AAGGCATTGG GTCGCCGGAC AAGCTGCCGG TGCTCAAGGG CAAGGTACGT AGCTGGCTGG TCCAGAAGGA AGAAGTGATC GCCTTCGTCC AGGCACGCGA ATCGCAGGGC GGCGCCGGCG CGCTGATGGT CCTGCTGCGC CAGCCCAAGA CCTGA
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Protein sequence | MSHGAKPTSK PPHRMGLHDL ATVRDGLKAD AERREAERQA AEAAARRAEE EANVFRTSIG QVSNLRDRNR VEHPVKKPNP EPVQTRLNDK AVLEASLSDE FDVENLLDVD ETMSFRRPGI GEDVIKKLRR GEWVPQDKVD LHGLRSDEAR EALANFLRRS VRNGVRCVRV IHGKGIGSPD KLPVLKGKVR SWLVQKEEVI AFVQARESQG GAGALMVLLR QPKT
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