Gene Rmet_0683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0683 
Symbol 
ID4037472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp755491 
End bp756165 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content67% 
IMG OID637976058 
ProductSmr protein/MutS2 
Protein accessionYP_582838 
Protein GI94309628 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00169527 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.676514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCACG GCGCCAAACC CACCTCCAAG CCCCCCCACC GCATGGGCCT GCACGATCTG 
GCCACGGTCC GCGACGGCCT CAAGGCCGAC GCCGAGCGCC GCGAAGCCGA ACGGCAAGCC
GCCGAGGCCG CCGCCAGGCG CGCCGAGGAA GAAGCCAACG TGTTCCGCAC CAGCATCGGG
CAGGTCAGCA ACCTGCGCGA CCGCAACCGC GTCGAGCATC CCGTGAAGAA GCCGAACCCG
GAGCCGGTGC AAACCCGTCT CAACGACAAG GCCGTGCTCG AGGCGTCGCT GTCCGATGAA
TTCGATGTCG AGAACCTGCT CGATGTCGAC GAGACGATGT CGTTCCGGCG TCCCGGCATC
GGCGAGGACG TCATCAAGAA GCTGCGTCGC GGCGAATGGG TGCCGCAGGA CAAGGTCGAC
CTGCACGGCC TGCGCTCCGA CGAGGCCCGC GAGGCGCTGG CCAACTTTCT CCGCCGATCG
GTGCGCAATG GCGTGCGATG CGTGCGCGTG ATTCACGGCA AAGGCATTGG GTCGCCGGAC
AAGCTGCCGG TGCTCAAGGG CAAGGTACGT AGCTGGCTGG TCCAGAAGGA AGAAGTGATC
GCCTTCGTCC AGGCACGCGA ATCGCAGGGC GGCGCCGGCG CGCTGATGGT CCTGCTGCGC
CAGCCCAAGA CCTGA
 
Protein sequence
MSHGAKPTSK PPHRMGLHDL ATVRDGLKAD AERREAERQA AEAAARRAEE EANVFRTSIG 
QVSNLRDRNR VEHPVKKPNP EPVQTRLNDK AVLEASLSDE FDVENLLDVD ETMSFRRPGI
GEDVIKKLRR GEWVPQDKVD LHGLRSDEAR EALANFLRRS VRNGVRCVRV IHGKGIGSPD
KLPVLKGKVR SWLVQKEEVI AFVQARESQG GAGALMVLLR QPKT