| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0674 |
|---|
| Symbol | |
|---|
| ID | 4037463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 746198 |
|---|
| End bp | 747511 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637976049 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_582829 |
|---|
| Protein GI | 94309619 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0231526 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.492835 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACGA CCGCAGTCAG TTCCGGCGCG CAAGACGCCG GCTTCGAGGA CGCCACCTAC
CGCAAGGTGA GCTGGCGCCT GGTGCCCTTC CTGTTGCTCT GTTACGTGGT GGCCTATCTG
GACCGCGTCA ACGTGGGCTT CGCGAAGCTG CAGATGCTCA ACGACCTCAA GTTCAGCGAG
ACGATCTACG GCCTCGGCGC GGGCATCTTC TTCATCGGCT ACTTCATCTT CGAAGTGCCG
AGCAACGTGA TCCTGCACAA GGTGGGGGCG CGCATCTGGA TCGCGCGGAT CATGATCACC
TGGGGCCTGA TCTCGGCGGC GATGATGTTC GTCACTACGC CGATGATGTT CTACGTGCTG
CGCTTTCTGC TGGGCGTGGC GGAAGCGGGC TTCTTCCCGG GCATCATCCT GTACCTGACC
TACTGGTACC CGGCCAGCCG TCGCGGACGC ACGACCACGT ACTTCATGAC GGCCATTGCG
CTGTCCGGCG TGATTGGCGG CCCGCTGTCC GGTTGGCTGA TGCAATCGTT CGACGGCCAC
AACGGCTGGT CGGGATGGCA ATGGATGTTC CTGGTCGAAG GCATCCCGTC GATCCTGGTG
GGCCTGTGGG TGCTGGCGTA TCTCGACGAC CGCATCACCC ACGCCAAGTG GCTGACCGAT
GACGAGAAGG CGCTGCTCCA GCGGAATATC GCCAACGAGG ACCAGCACAA GGAAGACCCG
CCCGTGGCCC AGGTGCTGTC GAGCCCGCGC GTGTGGCTGA TGAGCGCGAT CTACTTCAGC
TTCGTGATGG GCCTGTATGG CGTGAGCTTC TGGCTGCCGA CGATCATCAA GCAGACCGGC
GTGAAAGGCG CGCTCGATGT GGGCCTGCTG ACCGCGATCC CCTACGGGTG CGCGGTGGTC
GGGATGATCC TGTTCGCGCG CAGCGCCGAC CGTCGCGGCG AGCGGCGCTG GCATATCGCG
ATTCCGGCGC TGGCCGGCGC GGTGGGTCTG GTGCTGTCGG TGCAATGGCA CAGCGACACG
ACCATGGCGA TGGTGGCCCT GACGATCGCC ACGATCGGCA TCCTGACCAC GCTGCCGCTG
TTCTGGAGCC TGCCGACGTC CTTCCTGGCC GGAACCGGCG CCGCCGCGGG CATCGCGCTG
ATCAATTCCC TTGGGAACCT GGCTGGCTTC CTGAGCCCCT ACGCAGTGGG CTGGCTCAAG
GACATGACGC AAAGTACCGA CTCAGGCATG TACCTGCTGG CGGTCTGCAT GGTGGTGGGC
GCTGCGCTGA CGCTGTCGGT GCCGGCGCGG ATGGTGAATC AGAAGAAGGA TTGA
|
|---|
| Protein sequence | MTTTAVSSGA QDAGFEDATY RKVSWRLVPF LLLCYVVAYL DRVNVGFAKL QMLNDLKFSE
TIYGLGAGIF FIGYFIFEVP SNVILHKVGA RIWIARIMIT WGLISAAMMF VTTPMMFYVL
RFLLGVAEAG FFPGIILYLT YWYPASRRGR TTTYFMTAIA LSGVIGGPLS GWLMQSFDGH
NGWSGWQWMF LVEGIPSILV GLWVLAYLDD RITHAKWLTD DEKALLQRNI ANEDQHKEDP
PVAQVLSSPR VWLMSAIYFS FVMGLYGVSF WLPTIIKQTG VKGALDVGLL TAIPYGCAVV
GMILFARSAD RRGERRWHIA IPALAGAVGL VLSVQWHSDT TMAMVALTIA TIGILTTLPL
FWSLPTSFLA GTGAAAGIAL INSLGNLAGF LSPYAVGWLK DMTQSTDSGM YLLAVCMVVG
AALTLSVPAR MVNQKKD
|
|---|
| |