| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0659 |
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| Symbol | |
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| ID | 4037448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 725028 |
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| End bp | 726404 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637976034 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_582814 |
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| Protein GI | 94309604 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.470108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCACT ATGTCAACCG CCCGTTGCTG TATGTCTCCA GGCATCACGA CGCGTCGTTG
TGCCGTTATC TGTCGCAGCA CGGCTGGAAG CTGGTGTTCG CGAACAGCCT CGAGGACCTG
GCCGCGCTGC CGCTCGATGG ACCATTCTCG GCGGGCCTGC TCGATTTCCA GAGCGGCTTC
AGCGATACCG ATCTCGAGTT GATGGAGCCA TGGCTGGCGA CGCGCCAGAT CGGCTGGATC
GGTGCGATCA GCTGCGCCGA CGAGCTGACA GACACCGCGC GCAAGCTGCT CGGCCTGTAC
TTCATTGACT ACTACACAGC GCCATTCGAC ATGGCCGAGC TAAGCCGGAC GCTCGGACAC
GCGGTTGGCA TGGCAGCCCT GCGGCCGGGC CGCGAGCAAC CAGCCGTGCC GCTGACGCGC
CCGCACGGGA TCATCGGCGA ATGCAATGCC ATGCAGGCGC TGTTCCGCAG CATCGAGAAG
GTGTCGCGGT GGGACACGCC GGTACTGATC TCCGGTGAAT CCGGCACCGG CAAGGAACTC
GCCGCGCAGG CCATCCATCG CGCCTCGCGC CGGGCCAACC AGCCGTTCGT CGCGGTCAAC
TGTGCGGCCA TCCCGCCCAC CCTGCTGATG TCCGAACTGT TCGGCTACGA GCGTGGCGCC
TTCACGGGCG CGACCAAGCG CAAGCCGGGC CGGATCGAGA TCGCGCAAGG CGGCACGCTG
TTCCTGGATG AAATCGGCGA CATGCCGCTC GAGAGCCAGA CCAGTCTGCT GCGCTTCCTG
GAAACAGGCC GGATCGAACG GCTGGGTGGT ACCGAATCCG TCGCCGTCGA TGTCCGGGTC
ATCTCGGCCA CGCACGTCGA CCTCGAAGCC GCCGTGGCGA CCGAGCGGTT CCGTGGCGAC
CTCTTTCACC GCCTGTGCGT GCTGCGCGTC AAGCAGCCCC CCCTGCGCGA ACGCGGCTCC
GATGTGCTGC TGCTGGCCGA ACACATCCTG GATTCCGTCC GCAAGGACTC GCCCGAGCAT
ATCCGCGGCT TTTCGCCCAT GGCCCTGCGT GCCATCACCA CTCATGCCTG GCCAGGCAAC
GTGCGCGAAC TGCTCAACCG GATCCGCCTT GCCGCGGCGA TGTGCGAGAA CGGGGTCATC
CAGCCCTCCG ACCTCGAACT CGACACGCCC GTGGAAAGCA AGCCGCCGAC GCTGGCCGCG
ATTCGCGAAG CGGCCGAGCA GGCCGCGATC CTCGAAGCCC TGCAACGCCA CCACGAACGT
TTGATCGACG TGGCGGCCGA GCTTGGCATC TCGCGAGTCA CGTTGTTCCG ACTCATGCGC
GACTACAAGC TGCAGGTGCG GAAAGGCAAC GTGGGACTGG TCTGCGTGCA GAACTGA
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| Protein sequence | MSHYVNRPLL YVSRHHDASL CRYLSQHGWK LVFANSLEDL AALPLDGPFS AGLLDFQSGF
SDTDLELMEP WLATRQIGWI GAISCADELT DTARKLLGLY FIDYYTAPFD MAELSRTLGH
AVGMAALRPG REQPAVPLTR PHGIIGECNA MQALFRSIEK VSRWDTPVLI SGESGTGKEL
AAQAIHRASR RANQPFVAVN CAAIPPTLLM SELFGYERGA FTGATKRKPG RIEIAQGGTL
FLDEIGDMPL ESQTSLLRFL ETGRIERLGG TESVAVDVRV ISATHVDLEA AVATERFRGD
LFHRLCVLRV KQPPLRERGS DVLLLAEHIL DSVRKDSPEH IRGFSPMALR AITTHAWPGN
VRELLNRIRL AAAMCENGVI QPSDLELDTP VESKPPTLAA IREAAEQAAI LEALQRHHER
LIDVAAELGI SRVTLFRLMR DYKLQVRKGN VGLVCVQN
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