Gene Rmet_0653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0653 
Symbol 
ID4037442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp718373 
End bp718546 
Gene Length174 bp 
Protein Length57 aa 
Translation table11 
GC content59% 
IMG OID637976028 
ProductFlp/Fap pilin component 
Protein accessionYP_582808 
Protein GI94309598 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3847] Flp pilus assembly protein, pilin Flp 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.158204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTC TGACCCAAAA CCTGAAGCGT TTCGTCCGTG ATGAAGACGG CGTCACCGCC 
ATCGAATACG GCCTGATCGC CGCGCTCATC GCCGTCGTGA TCATCGCCTC GGTGCAACTC
GTCGGCCAGA ACCTGAGCAA GGTCTTCAGC CTCATTGCCG GCGAACTCGG CTAA
 
Protein sequence
MQRLTQNLKR FVRDEDGVTA IEYGLIAALI AVVIIASVQL VGQNLSKVFS LIAGELG