Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0648 |
Symbol | |
ID | 4037437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 715009 |
End bp | 715854 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637976023 |
Product | Flp pilus assembly CpaB |
Protein accession | YP_582803 |
Protein GI | 94309593 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.130635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.420596 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAACA CGCGAGCAAT CCTGATGCTG CTGATTGCGC TGGTGGCCGG CGCGGCGGCG GTGGTTTCCG CATCCCGCTG GCTGCTGCAG CAGTCGTCCA GCTCGGTCAA GCAGGTGGTG GTGGCCGCGA ACGATCTCGA TCTCGGCCAG CCGCTCAATG GCAGCCAGCT CAAGCTCGTC AGCTGGCCCG CCGGCAGCGT GCCGCCCGGT GCGTTCGAAG ATCCCAAGAC GCTGGACGGG CGCGTGGTCC GCACCAGCTT GCAACGCGGC GAGCCCATTA TCGACGCGAA GCTGGCGCCG GTGGGCACCA AGGGCGGCCT CTCCGCCGTC ATCAACGACG GCAAGCGCGC CATCACGGTT CGTGTCAACG ATGTGGTGGG CGTGGCTGGC TTCGCGCTGC CAGGCAACTA CGTCGATGTG ATCGTCAACA CCAACGAGGA CACCAAGAGC GCGCAGAACG GCAGCATCTC GAAGATCGTG CTCGAGAAGA TTCTGGTGCT GGCCGTGGCG CAACAGGTCA GCCGCGATGA CACGCAGCCG AAGGTGGTCA ACGCCGTGAC GCTGGAAGTC TCGCCGGATC AGGCCGAGAA GCTCGACGTG GCGCGCAGCG TGGGAACGCT GTCGCTGGTG CTGCGCAATC AGATGGACGT GGCCGACATC AACACGGGCG GCGCCACCAA GCACACGCTG CTCGGCAAGG CCGAACTGCC CGCGCCGGCT CCGCTCGCTG CGCCGGCTCC CGTTACGCGC ACGGTGGTCA AGACCCGCAC GGTCGCCGCC GCACCGCGCG CTGGCAACTG CGTCGGCGTG CTCGCAGGCA TCCAGGGCAG CCTGGAGTGC TTCTGA
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Protein sequence | MKNTRAILML LIALVAGAAA VVSASRWLLQ QSSSSVKQVV VAANDLDLGQ PLNGSQLKLV SWPAGSVPPG AFEDPKTLDG RVVRTSLQRG EPIIDAKLAP VGTKGGLSAV INDGKRAITV RVNDVVGVAG FALPGNYVDV IVNTNEDTKS AQNGSISKIV LEKILVLAVA QQVSRDDTQP KVVNAVTLEV SPDQAEKLDV ARSVGTLSLV LRNQMDVADI NTGGATKHTL LGKAELPAPA PLAAPAPVTR TVVKTRTVAA APRAGNCVGV LAGIQGSLEC F
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