| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0640 |
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| Symbol | |
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| ID | 4037429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 706647 |
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| End bp | 707624 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637976015 |
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| Product | type II secretion system protein |
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| Protein accession | YP_582795 |
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| Protein GI | 94309585 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.295246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGA TCTTCTATGC CTTCGGCATC TTGCTGTTCG TCGCCGTGGT GCTCAGTGTC
GAAGCCATCT ATCTGTGGTG GAACAATGCC CACGGCCCCG CGGCCAAACG CATCGAAGCG
CGGCTGAGAG CGCTTTCTGC CGGCGGACAC GTCAGCGCCG AACGCCTGTC CATTCTCAAG
AAGCGCCTGC TCAGCGATTC GCCGCGGATG CAGCGCTGGC TCATGAGCGT GCCGCGTATC
GGCGCGCTGG ACCGCTGGCT CGAGCAGTCC GGCAGCACAT GGTCCGTGGC ACAGCTGTTC
GGCTACTGCG GCCTGGTGGT GCTGTGCGCG GTGGCGCTGA TTCCGCTGGT GCCTGTGCCG
CTGCCGATCA TACTGGGCTG CATGGCGTTC GTCTGGTTGT TGCCGTTCCT GCATGTCATG
CGGCTGCGCA CCAAGCGGCT CAAGCAAATG GAAGTGCAGC TGCCAGACGC CGTCGACATG
ATCAGCCGCG CGCTGCGTGC TGGCCACTCG TTCGCCGGAG CGCTCGGCAT GGTCGGCCAG
GAAATCAAGG CGCCGCTGGG TCCCGAGTTC CGCACCACGT TCGAAGAGAT CAACTACGGC
GTGGCGCTCG ACGAGGCCAT GACGAACCTC GCCATGCGTG TGCCAGTGGG CGACCTCCGC
TACTTCGTCA TCGCCGTGCT GATCCAGCGC GAGAGTGGCG GCAACCTCGC GGAGATCCTC
GACACGATCG GCACGATGGT GCGCGAGCGG TTGAAGCTCT TCGACAAGAT CCGCGTGCTC
TCGGCCGAAG GGCGACTCTC CGCGTGGATT CTCGGCCTGC TGCCATTCGG CACGGCGGGC
CTGATCATGG TGGTCAATCC GGGCTTCATG CGGGTGTTGT GGGAAGACCC GATTGGCTGG
CGAATGGTAG GTGCCGCCAT GACGTCGATG ATCTTCGGCG TGCTGTGGAT GCGCAAGATC
ATCCGCATCC GGGTATGA
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| Protein sequence | MSTIFYAFGI LLFVAVVLSV EAIYLWWNNA HGPAAKRIEA RLRALSAGGH VSAERLSILK
KRLLSDSPRM QRWLMSVPRI GALDRWLEQS GSTWSVAQLF GYCGLVVLCA VALIPLVPVP
LPIILGCMAF VWLLPFLHVM RLRTKRLKQM EVQLPDAVDM ISRALRAGHS FAGALGMVGQ
EIKAPLGPEF RTTFEEINYG VALDEAMTNL AMRVPVGDLR YFVIAVLIQR ESGGNLAEIL
DTIGTMVRER LKLFDKIRVL SAEGRLSAWI LGLLPFGTAG LIMVVNPGFM RVLWEDPIGW
RMVGAAMTSM IFGVLWMRKI IRIRV
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