| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0639 |
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| Symbol | |
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| ID | 4037428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 705624 |
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| End bp | 706595 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637976014 |
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| Product | type II secretion system protein |
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| Protein accession | YP_582794 |
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| Protein GI | 94309584 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.297778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGACA TCATGCAGGG GTTTCGGGCA GACCAGTTGA TTGTGCTGGC GCTGGTCTTC
GTTGCGGCGT TCGGCACGGT ACTTGGCGTG CTCTATGTGT TCTCGCCAGA CCGCATGCGC
GGCAGGATGG AGCAGATCGC CAGCGAGACT GGCACTGTCC CGGGCAACGC CGGGCAGCAG
CAGGCCTGGG TCGAGAAGCT CGTGAAATGG GCGCAGCCGG TCTCGCGGCT CTCGTTGCCC
AAGGAGGGTT GGGAGAATTC GCAGCTGCGC GTGCGCTTCA TGAACGCCGG ATGGCGCGAT
GCGAGCGCCG CCCCGCTGTA CTTCGCCGCC AAGACGCTGC TGGCGGTGGC GCTCCCGATG
ATCGGACTGA TCGCGACAAG CAGCGTCCCG GCATTCCAGG AACAGAGCAC GACGTTCGCG
GTGCTGGCGG TGCTGGCCGC GATTGGTTAC TACATTCCGA ACATCGTGCT GTCCCGGAAA
GTGACGGCAC GCCAGAGAAC GGTGTTCGAG GAGTTCCCCG ACGTCATCGA CCTGCTGACC
GTCTGCGTGG AAGCCGGCCT CGGCCTCGAT GCCGCGCTGA TGCGCGTGGC CGACGAACTT
GCGCTGCGCT GCCCGGTGCT GGCCGATGAA CTGCAACTGA TGCTGCTGGA GCTCCGCTCC
GGCTTCTCGA AGGAGAAAGC GTTGAGCAAT CTGTCGCTGC GCACCGGCGT CGAGGACGTC
GACAAGTTCG CGTCCATGCT GATCCAGGCG GACCGCTTCG GCACCAGCCT TGGCGAATCC
TTGCGGGTGC TGTCCGACAT GCTTCGCACC AAGCGCCGGA TGCGCGCGGA AGAGCAGGCG
GCGAAGATCG CGCTGAAGCT GCTGTTCCCG CTGATTTTCA CGATCTTCCC CACGCTCCTG
CTGGTGTTGC TAGGACCCGC ATTCATCCAG ATCTACCGCG TATTGCTGCC AACCATGACC
GGCACCAACT GA
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| Protein sequence | MQDIMQGFRA DQLIVLALVF VAAFGTVLGV LYVFSPDRMR GRMEQIASET GTVPGNAGQQ
QAWVEKLVKW AQPVSRLSLP KEGWENSQLR VRFMNAGWRD ASAAPLYFAA KTLLAVALPM
IGLIATSSVP AFQEQSTTFA VLAVLAAIGY YIPNIVLSRK VTARQRTVFE EFPDVIDLLT
VCVEAGLGLD AALMRVADEL ALRCPVLADE LQLMLLELRS GFSKEKALSN LSLRTGVEDV
DKFASMLIQA DRFGTSLGES LRVLSDMLRT KRRMRAEEQA AKIALKLLFP LIFTIFPTLL
LVLLGPAFIQ IYRVLLPTMT GTN
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