Gene Rmet_0611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0611 
Symbol 
ID4037400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp665546 
End bp666292 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content69% 
IMG OID637975986 
ProductTetR family transcriptional regulator 
Protein accessionYP_582766 
Protein GI94309556 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.287096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGA TCGTGAATCA GCGTCGTATC CCGGCAGGCG CCAAGGCGGA GCAGCGTATT 
CGCGACATCC TGCGCGTGGG CCGCGAAGTG TTCTCGGAGC TTGGCTACGA GCGGGCGACC
ACGACCGAGA TCGCGCAGCG CCTGGGGATT TCCGAGGGCA CGATCTTCAC GTACTTCCAC
AGCAAGCGGG ACCTGTGTGT CCGCGTGATC CAGGACTGGT ACGACGAGAT CATCGCGGCG
ATGGAGGGCG GCATGCCGCG CGAGGGCACC GCCCGGGCGC AACTGGAGTT TTTTATCGGC
ACGCACCTCC GGCTGTTCCT GATCCATGGC ACCGGCCTGT GCGCGCTGGT GCTGTCGGAG
GGGCGCGCCA AGGGGCAGGG GCTCGACGAG GTGTTCGTGC CGTTGCAACG GCGCTACACG
GCGCCGCTGA TGGCGCTGCT GGCCGCCGCC CAGGCGGGCG GGGAGATCCG GGCCGACATG
CCGTTGCGGC TGATGCGTTC GGCCATTCTG GGGCCGATGG AGCATATTCT CTGGGATGCC
ATCGTGAGCG GCCGCCCGGT CGACATCGAC CGCACCACGC AGGACATGAT CGCGCTGCTG
TGGCCCGCGC TGCAGCCGCA GAACCTGCAG GCCGCCGCGC TGGGGCAGTT CTATGGCGAG
GTCAGCGCGG CGCTGGCCCG GGTGCAGGCG GCGGGAGGGA CGGCGGGCTC CGCTGAAGGC
TCCGCCGAGG GTTCCGAAGC TTCCTGA
 
Protein sequence
MQQIVNQRRI PAGAKAEQRI RDILRVGREV FSELGYERAT TTEIAQRLGI SEGTIFTYFH 
SKRDLCVRVI QDWYDEIIAA MEGGMPREGT ARAQLEFFIG THLRLFLIHG TGLCALVLSE
GRAKGQGLDE VFVPLQRRYT APLMALLAAA QAGGEIRADM PLRLMRSAIL GPMEHILWDA
IVSGRPVDID RTTQDMIALL WPALQPQNLQ AAALGQFYGE VSAALARVQA AGGTAGSAEG
SAEGSEAS