| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0605 |
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| Symbol | |
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| ID | 4037394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 654484 |
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| End bp | 656787 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637975980 |
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| Product | patatin |
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| Protein accession | YP_582760 |
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| Protein GI | 94309550 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.37871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.778619 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAGAC TCGTTTCCGG GCCGCGCCGC GCACCGCTGC GCTGGCTGCC CTTGTTTTGC
CTGCTCATTG CGGGCCTGTT CCAGCAGGCC TACGCCGAGT GCAGCGCCAG CCACACCTCC
GCCGCCGATG CCGCACGACC GCGCATTGGC CTGGTGCTGT CCGGCGGCGG CGCACGCGGT
TATGCCCACA TTGGCGTGCT CAAGGCACTG GAACAGATGC ACGTGCCAAT CGATTGCATT
GCGGCGACCA GCATGGGGGC GGTGGTCGGC GGACTGTATG CGAGCGGGAT TCCGGCAAAC
GAACTCGACA CCCGGCTATC GCAGATCAAC CTGAGCGACA TCGTCTTCGA CCGTAACGAA
CGCGCGCACC TGCCGCAGAC GCTGCGCGAG GACAGTTTCG AATACCCGAT CGGCCTCTCG
GTCGGCTATG GCGACGGCAA GGTCAAGCTG CCCGGCGGGC TGGTGCAGGG CAACCGGCTG
CTGGCACTGC TGCAGGACTG GACGGCCCCG TGGCCCGGCG ACATCGATTT CGACAAACTG
CCCATTCCAT TCCGCACCAT CGCCACGGAC CTCAGCTCGG GTGCGCCCGT AGTGCTCGAG
AAAGGGTCCT TGCCGCGCGC AATCCGCGCC AGCGCGGCCG TGCCGGGCCT GTTCGCGCCG
TTCAAGGTGG ATGGGCGCAC GCTGGTGGAC GGTGGCCTGG TCAGCAACCT GCCTGTGCAG
ATGGCGCGCG ACATGGGCGC CGATATCGTC ATCGCGGTCA ATGTGGCCTC GCCACTCGAC
GACCCCTCCA ACCTCGATTC GCCAGCGGCC GTCACCCAGC AAATGGTGAC GATCCTGATG
AACCAGAATC TCGCCGCGCA GAAGGCATTG CTGGGTCAGC GGGATGTGCT GCTGGAACCC
GATCTCGGCG ATCTGTCGTT CACCGACTTC TCCAATGCGC GCCGTGGCGT GCAGCTTGGC
TACACGGCGG CTGAAGGCAT CGCGCCACGG CTGGCCGCGC TCGCGTTGCC GCCCGACGCG
TGGGACCAGT ACATCGCCGC CCGGGAAACG CATAGCGCGC GATTCGAGCC CAAGCGCATC
GACGCCATCG AGATCCATGC CTCGGGGCGC ATTCCGCCCA CCTACATCAA GCAGTATCTG
CGCACGCGCG AAGGCGACAC CTATGACGCC GAAGCGATCA ACCGCGACCT CTCGCAGCTC
TCCACCACCG GCAATTTCGA AAGCGTGACG CAGGATGTGG TTACCGAGAA CGGCCGGTCC
GTGCTCAAGA TCGACGCGCA GGAGAAATCG TGGGGGCCGC AGTTCCTGCT CTTCGGCTTC
GGCATGTCCA CAACGTTCGA CGGCAAGGGC GCGTTCAACC TGCAACTGGG TCACCGCTAT
CCGTGGCTAA CGCAAAGCGG TCTGGAGTGG CGCAACGACA TCGTGCTGGG CAGCACCCAG
GCCAAGTGGC ACACGGAGCT TCGCCAACCG GTGCTGGACC GGCTGGGGTT CTATATCGCG
CCATACCTCG AATACGGCCG CAAGCACGTC GATATCTACC CCGACAGCAG CCCCACCCGC
AGCACCACGC CGCTCACTGC CGTGCGCGTG GACACGGCGC TGGCAGGCGT CGACCTCGGG
TTGCCGATCG GCAGGCTGGG CGAGTTCCGC GTCGGCGCGA ACTATCAGCA GGTCCGCTAT
TACTCTGACT ATCTGATTGG CGCGTCAAGC AACGGCAAAT TCAGTGCCTC GGTGCAGCAG
CCGGTGGTAC GGGCGGAACT GACGATCGAC CAGCTCGATG ACCCGCTCTT TCCGCGCAAG
GGCTACTACT TCAATGCGGT GAACCAGCTA TCGTTCGGCG GCACGGACAA CAGCTTCGAC
GACGTCCACG GCAAGGCCCT GTGGGCGGGC AGCTACGGGC GCCATACGCT GAACCTGGCG
GCCGAGGGGG CGATGACCTA CAACGACCAC CGCACCTCCG GCAGCGTCAG TGGCGGCCTG
GGATTCACGC TGGGTGGATT CCAGCGCCTG TCAGCCTATG CGCCGGACCA GTTCTCGGGC
AACTACCTGC TCTACGGCCG CATCACGTAC CTGAACGAAC TGCGTGAATT CGTGCTGCCG
GGGCTGCGCA CAACGGTGTT CGGCTCCAGC CTCGAAGTGG GCGACGTCTG GCTCAGGCGC
CGCAACTTCG GCAGCGGGCC CTACAAGTCC AGCGCCAGTC TGTTCATCGG CGGCAACAGC
GTGATCGGCC CGCTCTACTT TGGCGTCGCG GCGGCGCCGC AGGGTGTGTG GAATATCTAC
CTGCAACTGG GCCGCGTGTT CTAG
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| Protein sequence | MSRLVSGPRR APLRWLPLFC LLIAGLFQQA YAECSASHTS AADAARPRIG LVLSGGGARG
YAHIGVLKAL EQMHVPIDCI AATSMGAVVG GLYASGIPAN ELDTRLSQIN LSDIVFDRNE
RAHLPQTLRE DSFEYPIGLS VGYGDGKVKL PGGLVQGNRL LALLQDWTAP WPGDIDFDKL
PIPFRTIATD LSSGAPVVLE KGSLPRAIRA SAAVPGLFAP FKVDGRTLVD GGLVSNLPVQ
MARDMGADIV IAVNVASPLD DPSNLDSPAA VTQQMVTILM NQNLAAQKAL LGQRDVLLEP
DLGDLSFTDF SNARRGVQLG YTAAEGIAPR LAALALPPDA WDQYIAARET HSARFEPKRI
DAIEIHASGR IPPTYIKQYL RTREGDTYDA EAINRDLSQL STTGNFESVT QDVVTENGRS
VLKIDAQEKS WGPQFLLFGF GMSTTFDGKG AFNLQLGHRY PWLTQSGLEW RNDIVLGSTQ
AKWHTELRQP VLDRLGFYIA PYLEYGRKHV DIYPDSSPTR STTPLTAVRV DTALAGVDLG
LPIGRLGEFR VGANYQQVRY YSDYLIGASS NGKFSASVQQ PVVRAELTID QLDDPLFPRK
GYYFNAVNQL SFGGTDNSFD DVHGKALWAG SYGRHTLNLA AEGAMTYNDH RTSGSVSGGL
GFTLGGFQRL SAYAPDQFSG NYLLYGRITY LNELREFVLP GLRTTVFGSS LEVGDVWLRR
RNFGSGPYKS SASLFIGGNS VIGPLYFGVA AAPQGVWNIY LQLGRVF
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