| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0591 |
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| Symbol | |
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| ID | 4037380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 635812 |
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| End bp | 639177 |
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| Gene Length | 3366 bp |
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| Protein Length | 1121 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637975966 |
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| Product | putative sensor protein |
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| Protein accession | YP_582746 |
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| Protein GI | 94309536 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCTG AGACGGCCGC GACCCGTTCC ACCCTCCCAA TACCTGTGCC GGCTGCCCGC
TGGGGCCTGC TGCTGGCCGC CGTGGGCTAC TTCGCGCTGG CGACAGCGGG GATCTGGCTG
GGCCGGCAGC CCGGCACCGG CGCCATGCTG TGGATGGGCA ACGCCTTCGG GCTGGGCCTG
CTGCTGCACC GCCCCCGACA GGAAGCGCCG GCACTGCTCG CGTCGATGCT GGCAGCAGAC
GTCCTCGCCA ACCTGCTGGC CGACCACACG GCTGGCGTGG CGCTGCTGCT GGCCGGGGCG
AACCTGCTCG AGATCGGCGG CATGGCCATG CTGCTGCGGC TGATGTCCGG CAGTGGCACC
CTCGCACGCA CCGGCCCGCT GGCCACCTTC GCGCTCACGA TCGGCGTGGC GGCCACGCTC
GGGCCGGCCA TCAGCGGCGT GCCCGGCGCC GCCGTGCTGG CCACCGCATA CGGCACCCAG
TTCCCGCGCG TGTGGTGGGC GTGGTGGAAC GCCGGCGCCA TCGGCATGGT GATGCTGTTG
CCGCTTATGG TGTCGATCTC GCGCGAGCGC GTGCAGGCTG CGCTCCGCCG CCCGATGCTG
CTCCGCCTGA TTGCACTGTT CGTGCTGTGC ATGGCGATCG GCACGGGCGC GATCGTGGCC
GGCCATGAGC CGTTCGTCGT GATGTCGCTG CCGTTGGTCA TTGTGGCGCT GGCCAGCAAT
CCGTTCGCCA CGGCGCTGCT GACACTTGTG TCGGCGCTGG CTCTGGAGGG CATCGCGCAT
CTGGGCGGCA TGCAGTTCCT GGCCTCGCGT GCCACGCCGC TGTCAGGCGC GCTGATCCTG
GTCTTCCCGA TCTGCATCGC GTTCATGACC GAGCAGAACC GCAATGGCCG GGCCGAGCTG
CGCAGTAGCG AACGCCGCTT CCGGCAGGCG CTCGAACATT CGGCCATCGG CATGGCATTG
GTCGGGCTCG ATGGCAAGTG GCAACTGGTC AATCGCGCGA TGATGGACCT GCTCGGCTAC
AGCGCCGAGG AACTGCGCGA CCTGCCGTTC CAGGTCATGA CCCACCCCGA GGACCTCGCC
GCCGACCTGA GCCAGCTCGA CCGGCTCCTG ACGGGCGAGA TCGACGCATA CCGGCTCGAG
AAACGTTACC GGCACAAACA GGGCCACTAC CTGTGGGCGC TGCTGGCGGT CTCGCTGGTG
CGCGACGAGC ACTCGGGCGA GCCCCGGCAT TTCATCGCCC AGATCGAGGA CATTCACACG
CGCAAGCTGG CCCAGGAACA ACTCGAGGCA CAGACCCGCC GCACACAGCT TGCCGTCGAG
GCCGGTGGCG TCGGCATCTG GGAATGGGAC TTCAATACGG CGGCCATCAC GTGGGACGCG
CGCATGTATG CGCTGCACGG CACGGATATG GAGCTCGGGC CGCCTTCGCT GGCCGAGTGG
ATCGCGAAGA TCCATCCCGA GGATGTCAGC CGAGTCAGTT CGGAGATGCG CCAGGCCATC
CGCGGCGCGC GCCGGTTCGA TACCGAATAC CGCATCGTTC GCCCCGCCGG CGAGACCCGG
CATGTGCGCG CCATGGCCAT GATCTCGCGC CACGAGGACG GCACCGCCCA CTCGCTGGTC
GGCACGAACT GGGACATCAC CGAGCAACGC ACGCTGACAC GCGCGCTGTT CGAGGAGAAG
GAACGGCTGC AGATCACGCT GCGCTCGATC GGCGACGCCG TGATCTGCAC GGACCGCGTG
ATGCGCGTTA CGTTCATGAA CCCGATCGCC GAACAGCTTA CGGGCTGGAG TCTGGATGCC
GCGATGGGCC AGCCGCTCGA CCAGGTGTTC CGCATCGTCG ACGAGATCAC CGGACTCACG
ATCCCGAGCC CGGTCGAGCA ATGCCTGGAA ACGCTGCGCC CCGCCTACCT GCAGGAAGGT
GCGGTGCTGC AGAGCCTGAC CGGCGAGCGG CACGACGTGC AGGACTCCGC CGCGCCAGTG
CTGACCAACG ATGGCGGCGT GCTGGGCGCG GTGCTCGTGT TCCAGGACAT CACCTCGTCG
CGCGCGATGC AGCGCGAACT GGCCCACTCG GCCACCCACG ACGCCCTGAC CGGGCTGCCC
AACCGGGCCT GGTTCGAAAA GCGCCTGCGC GAGGCGTGCG AGCAGGCGCG CCTGCTCGGA
CACCGCACCG CGCTCTGCTT CATCGATCTG GACCGCTTCA AGATCGTCAA CGACACGGCC
GGCCACGGGG CCGGGGACGT GCTGCTGCGC GAGCTTGGCT ACGTGATCCG CCACCATGTA
CGCCCCGACG ATCTGCTGGC GCGCCTCGGG GGCGACGAGT TCGCGCTGCT GCTCAAGGAT
TGCAGCATCG ACCACGCCGA ACAGGTCTGC CAGAAAGTTA TCAACGCGAT CCGCGAGCGC
CGCTTTCCGT GGGAAGGGCG CGTCTATGAC GTGGGCGCCA GCATCGGCAT TGCCGCGATC
GACGCCGACG CGCCACCGGT CAGCGAGTTG ATGAGCCGTG CCGACGTGGC CTGCTACGCC
GCCAAGGCAG CAGGCCGCAA CCGCGTATCG GTCTATCGCC GCGACGAAAG CGATGCCAGG
CGCCACCATC GCGAACTCGA GGTGGCGGCG GGCATTCACT CGGCGCTGGA GGCCAACCGC
TTCCGCCTGT ACGTGCAGGA AATCCAACCG CTGCAGCCCG AGACGGAGCA CGCGCGCCAC
GTGGAAGTGC TGGTGCGGAT GGTCGATGAA CAGGGCACGC TGATCATGCC CGGCGCGTTT
ATCCCCGCGG CCGAACGCTA CGACCTGATG GGCCATGTCG ACCGCTGGGT GATCCGCAAC
GTGCTTCACC AGTTCGGCGA ACGGCTGGCG CGGGTGCCGG ATCTGGTGGT GTCGATCAAC
CTGTCTGCCA ACTCGCTCGG TGAACCGTTC CTGCTGCCAT TCCTGCACAC CACGCTGGAA
GATTCGATGC TGCCCGCGGA GCGCCTGCTG CTGGAAATCA CCGAAACCGC GCTGATCCAC
AACATGACCG CCGCCAGCCG CCTGCTGAAG GAGATGCGCC ACGCCGGCTG CACCGTGGCG
CTGGACGACT TCGGCTCGGG GCTGTCGTCG TTCGCGTACC TGAAGCAGTT CCCGGTGGAC
TACCTGAAGA TCGACGGCAG CTTCATCCGC AACCTGGCCG ATAACGTAGT GGATCGCGAG
ATCGTCAGCT CGATCAACGA CATCGGCCAC CGGCTCGGGG TGCGCACGGT GGCCGAATGG
GTCGAGGACG AAGCCACGCT GTGCGTGCTG CGCGCGATTG GCGTCGACTA TGCGCAGGGC
TACGCTATCG GCCGCCCCAT GCCGATAGAG ATTTTCCTGG AGATCTGCGA GAACGCGGAG
ACCTGA
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| Protein sequence | MTPETAATRS TLPIPVPAAR WGLLLAAVGY FALATAGIWL GRQPGTGAML WMGNAFGLGL
LLHRPRQEAP ALLASMLAAD VLANLLADHT AGVALLLAGA NLLEIGGMAM LLRLMSGSGT
LARTGPLATF ALTIGVAATL GPAISGVPGA AVLATAYGTQ FPRVWWAWWN AGAIGMVMLL
PLMVSISRER VQAALRRPML LRLIALFVLC MAIGTGAIVA GHEPFVVMSL PLVIVALASN
PFATALLTLV SALALEGIAH LGGMQFLASR ATPLSGALIL VFPICIAFMT EQNRNGRAEL
RSSERRFRQA LEHSAIGMAL VGLDGKWQLV NRAMMDLLGY SAEELRDLPF QVMTHPEDLA
ADLSQLDRLL TGEIDAYRLE KRYRHKQGHY LWALLAVSLV RDEHSGEPRH FIAQIEDIHT
RKLAQEQLEA QTRRTQLAVE AGGVGIWEWD FNTAAITWDA RMYALHGTDM ELGPPSLAEW
IAKIHPEDVS RVSSEMRQAI RGARRFDTEY RIVRPAGETR HVRAMAMISR HEDGTAHSLV
GTNWDITEQR TLTRALFEEK ERLQITLRSI GDAVICTDRV MRVTFMNPIA EQLTGWSLDA
AMGQPLDQVF RIVDEITGLT IPSPVEQCLE TLRPAYLQEG AVLQSLTGER HDVQDSAAPV
LTNDGGVLGA VLVFQDITSS RAMQRELAHS ATHDALTGLP NRAWFEKRLR EACEQARLLG
HRTALCFIDL DRFKIVNDTA GHGAGDVLLR ELGYVIRHHV RPDDLLARLG GDEFALLLKD
CSIDHAEQVC QKVINAIRER RFPWEGRVYD VGASIGIAAI DADAPPVSEL MSRADVACYA
AKAAGRNRVS VYRRDESDAR RHHRELEVAA GIHSALEANR FRLYVQEIQP LQPETEHARH
VEVLVRMVDE QGTLIMPGAF IPAAERYDLM GHVDRWVIRN VLHQFGERLA RVPDLVVSIN
LSANSLGEPF LLPFLHTTLE DSMLPAERLL LEITETALIH NMTAASRLLK EMRHAGCTVA
LDDFGSGLSS FAYLKQFPVD YLKIDGSFIR NLADNVVDRE IVSSINDIGH RLGVRTVAEW
VEDEATLCVL RAIGVDYAQG YAIGRPMPIE IFLEICENAE T
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