Gene Rmet_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0588 
Symbol 
ID4037377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp630829 
End bp632205 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content66% 
IMG OID637975963 
ProductFis family transcriptional regulator 
Protein accessionYP_582743 
Protein GI94309533 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.651672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCTA ACCCGATCGA AGCGCCCCTG GACGCCGAGG CAACAAGCCC CGTGCTGACC 
GTGCTCATCG TCGAGGACGA CGCCGACGTG CGGCTCGGCT GCGAACAGGC GCTGCGCCTC
GAAGGCATTG CCACACGCGC GGTCGGCAGC GCCGAAGCTG CGCTGCGTGA GGTCGATGCG
GGCTACGCGG GCATCGTCGT CAGCGATATC AATCTGCCGG GATCGGACGG CATGGCGCTG
CTGCGCGAAC TCGCGTCGCG CGATGCTGCA CTGCCCGTCA TCATGATCAC CGGCCACGGC
GATATCACGC TGGCCGTGCA AGCCATGAAA CAGGGCGCCT ACGATTTCAT CGAGAAGCCG
TTCTCGCCAG AACGGCTCGT GGCCACCTGC CGGCGCGCGC TGGAGAAGCG TCGCCTGGCG
CTCGAGGTGG CAGACCTGCG AGCCCGGCTG GCGGGGCAGG AATCGCTCTC CGCGCGCCTG
ATCGGTCATT CGCCCGCCAT CGAGCGCCTG CGCCAGATGA TCACCGGCCT CGGCAACACG
ACCGCGAGCG TGCTGATTCA TGGCGAGACC GGCACCGGCA AGGAACTTGT GGCACGCTGC
CTGCACGAAG CCAGCGCGCG CCGGGCGCGG CATTTCGTGC CGATCAATTG CGGCGGGCTG
CCCGAGCAAC TGTTCGAATC CGAGATCTTC GGCCATGAGG CCGGCGCGTT CACGGGTGCG
GCCAAACGCC GCATCGGCAA GATCGAACAC GCTGAAGGCG GCACACTGTT TCTCGACGAA
ATCGAGAGCA TGCCGATGCA GATGCAGATC AAGCTGCTAC GCGTGTTGCA GGAGCGCGTG
GTGGAGCGGC TGGGCTCGAA TCAGGCGGTG CAGGTCAACG CGCGCGTGGT GGCGGCCACC
AAGGCCGATC TGCGCGCGGC GGCCGATGTG GGCCAGTTCC GCGCCGATCT CTATTACCGT
CTCAATGTCG TCACGCTGGA GCTTCCGCCG TTGCGAGAGC GCCGGGAGGA CATCCCGCTG
CTGTTCGAGC ACTTCGTCGC GCAGGCCGCG CTGCGATTCG AACGCGAGGC GATTCCGCCC
ACGCCAGCCG AGATGGCCGG ATTGATGGCC TACCCGTGGC CCGGCAACGT GCGCGAGTTG
CGCAACCTCG CCGAGCGCCA TGTACTGGGG CTGGGATGCC GGCCAGGCGA AGGCGGACAC
GATATGGCGC CACCTGCGGC CTTGCCGCTG GCGCAGGCGG TAGAACAGTT CGAACGTGCA
CTGATAGCAG ACGCACTGCG CCGCCATGAT GGCAATCTGA CACGCGCCGG CGAGTCGCTC
GGTATTGCCA AGACCACTCT TTTCGACAAG GTCCGCAAGT ACGGACTTTC GTCATGA
 
Protein sequence
MSANPIEAPL DAEATSPVLT VLIVEDDADV RLGCEQALRL EGIATRAVGS AEAALREVDA 
GYAGIVVSDI NLPGSDGMAL LRELASRDAA LPVIMITGHG DITLAVQAMK QGAYDFIEKP
FSPERLVATC RRALEKRRLA LEVADLRARL AGQESLSARL IGHSPAIERL RQMITGLGNT
TASVLIHGET GTGKELVARC LHEASARRAR HFVPINCGGL PEQLFESEIF GHEAGAFTGA
AKRRIGKIEH AEGGTLFLDE IESMPMQMQI KLLRVLQERV VERLGSNQAV QVNARVVAAT
KADLRAAADV GQFRADLYYR LNVVTLELPP LRERREDIPL LFEHFVAQAA LRFEREAIPP
TPAEMAGLMA YPWPGNVREL RNLAERHVLG LGCRPGEGGH DMAPPAALPL AQAVEQFERA
LIADALRRHD GNLTRAGESL GIAKTTLFDK VRKYGLSS