Gene Rmet_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0542 
Symbol 
ID4037331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp577418 
End bp578500 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content63% 
IMG OID637975917 
Producthypothetical protein 
Protein accessionYP_582697 
Protein GI94309487 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000010601 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACATCGA TGCACCGTTA CACCCTGCCT GTGGACCAGA CCGGCTGGTC CGTCGGCAGC 
CAGGTAGCGA CAGAGTTCAA CTGGGAATAC GACAATGGGT CGTCCAAGCT GCTGCAGCTC
TACGAGACGA GCAAGAAACA GCAGTGGAAC GCGAGCGACC GGATCGACTG GTCCCAGGAA
CTGGACCCGG AGAACCCGCA GGAACTCGAT GACCGCATGA TCCCGATCTA CGGCACCAAG
CTGTGGGACA AACTGGGCCA TAACGACCGC ATCGAGGTAC GCCGCCACCA GCAGGCACAT
TCGCTGTCGC AGTTCCTGCA TGGCGAACAG GGCGCATTGA TGGTCTCCGC GCGCATCGTG
CAGATGGTGC CTGGCATGGA TGCCAAGTTC TACGCAGCCA CGCAGACGAT GGACGAAGCC
CGCCACGTCG AGGCCTATTC GCGTCTGCTG CACGAGAAGG TCGGCCTGCT CTACCCCATC
ACGCCCGGCC TGAAGTCGCT GCTGGAAACC ACGCTGACCG ATTCGCGCTG GGACTTCTGC
TACCTCGGGA TGCAGGTGCT GGTGGAAGGG CTGGCGCTCG CCGCCTTCCA GCGCATTCGC
GACTTCGCGA AGAACCCGCT GGCCGCTTCG ATCAATGCCT ACGTGATGCA GGACGAGTCG
CGCCACGTCG CCTTCGGCCG CACCGCGCTG CGCGGCTACT ATCCACAACT GACGGAGGCC
GAACAACGCG AACGCGAGGA CTTCGTGATC GAAGCCTGCC AGTTGATGCG CGAGCGCTTC
GACCAGAAAG AAGTCTGGGG CCGGCTGGGC CTGCCCGAGG ACGAATGCGC GCAGGCGGTA
CGCGATTCGG AAACCATGCG GCTGTTCCGC CAGCGCCTGT TCAGCCGGAT CGTGCCGACG
GTCAAGGACA TCGGCCTGTG GAGCCAGCGC GTGCAGGACG CGTTTGCCGC CATGGGAGCG
ATCGAGTTCG CCAACGTCGA CGTCGAGGCC CAGTTCGCCA ACGATCACAA GGTGGCCGAG
GAATTCGACG CGCGCCGCCA TGTGATGGAC ACCATCAAGC AGGCCAGCGA CAGCGCGCAC
TGA
 
Protein sequence
MTSMHRYTLP VDQTGWSVGS QVATEFNWEY DNGSSKLLQL YETSKKQQWN ASDRIDWSQE 
LDPENPQELD DRMIPIYGTK LWDKLGHNDR IEVRRHQQAH SLSQFLHGEQ GALMVSARIV
QMVPGMDAKF YAATQTMDEA RHVEAYSRLL HEKVGLLYPI TPGLKSLLET TLTDSRWDFC
YLGMQVLVEG LALAAFQRIR DFAKNPLAAS INAYVMQDES RHVAFGRTAL RGYYPQLTEA
EQREREDFVI EACQLMRERF DQKEVWGRLG LPEDECAQAV RDSETMRLFR QRLFSRIVPT
VKDIGLWSQR VQDAFAAMGA IEFANVDVEA QFANDHKVAE EFDARRHVMD TIKQASDSAH