Gene Rmet_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0539 
Symbol 
ID4037328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp574345 
End bp574923 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content60% 
IMG OID637975914 
Productmanganese and iron superoxide dismutase 
Protein accessionYP_582694 
Protein GI94309484 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00002429 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000111544 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACACA AGCTCCCTTC TCTCCCGTAC GCGCATGATG CCCTCGCTCC GCATATCTCC 
AAGGAGACCC TGGAGTTCCA TCATGACAAG CATCACCAGA CCTACGTCAC GAACCTGAAC
AACCTGATCA AGGGCACCGA GTTCGAGAGC GCATCGCTGG AAGAGATCGT CAAGAAGTCG
TCCGGCGGCA TCTTCAACAA CGCCGCCCAA GTGTGGAACC ACACGTTCTA CTGGGAATCG
ATGAAGCCGA ACGGCGGTGG CCAGCCGACC GGCGCCCTGG CTGACGCGAT CAACGCCAAG
TGGGGTTCGT TCGACAAGTT CAAGGAAGAA TTCACGAAGG TGGCAGTGGG CACGTTCGGT
TCGGGCTGGG CCTGGCTGGT CAAGAAGGCC GACGGCTCGC TGGACCTGGT GTCGACCTCC
AACGCCGCCA CCCCGCTGAC CACCGACGCC AAGCCGCTGC TGACCTGCGA CGTGTGGGAA
CACGCCTACT ACATCGACTA CCGCAATGCT CGTCCGAAGT ACGTCGAGGC ATTCTGGAAC
GTCGTGAGCT GGGACTTCGC GTCGAAGAAC TTCGCCTGA
 
Protein sequence
MEHKLPSLPY AHDALAPHIS KETLEFHHDK HHQTYVTNLN NLIKGTEFES ASLEEIVKKS 
SGGIFNNAAQ VWNHTFYWES MKPNGGGQPT GALADAINAK WGSFDKFKEE FTKVAVGTFG
SGWAWLVKKA DGSLDLVSTS NAATPLTTDA KPLLTCDVWE HAYYIDYRNA RPKYVEAFWN
VVSWDFASKN FA