Gene Rmet_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0530 
Symbol 
ID4037319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp565730 
End bp566524 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content68% 
IMG OID637975905 
ProductXRE family transcriptional regulator 
Protein accessionYP_582685 
Protein GI94309475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0566101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000527807 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTATCG AACCCACTCA AGTCAGTCGC GAGGCCGAAC TCGGCGCATT TCTGCGCACC 
CACCGAGAGC GGCTGACGCC AAGCGACGTC GGCCTGCCGC CGGGCCGCAG GCGCCGCACA
CCGGGATTGC GGCGCGAGGA AGTTGCGCAG CTTTCGGGAT TGAGTGCCAC ATGGATCACG
TGGCTGGAGC AGGGGAGACC GGTGGCGATG TCCGTGCGCG CGCTGGGCAG TCTGGCCGAG
GCCCTGCGAC TGTCTCGCGC TGAACGCGCC TATCTGTTCG CGCTGGCTGG CAAGCCCGAA
CCGCGCCAGG ATGCCGAGCC CGCCGTGCCC GTCGCACTGC TTGCGAGCGT TCAGGCAATC
TCGGGGCCTG CCTATCTGCT GGATCGCCAA TGGACCGCCC GGGCATGGAA TGCAGCGGCC
GCCGACCTGT TCGTCGGCTG GCTCGATGCT GCGTCCGGAG AGCGGAACCT GCTGCGAGCG
ATGTTCCTGC CGACGGCGTT GCAGGCGTTG GTGGAGGATT GGCCGCACCG CGCCGCACGG
CTCGTGGCCG AGTTTCGTGT CCACAGCTTG CGTCATGCCG AAGATCCGCC GACACGCGCA
CTGATCGAGC GGCTCATGGA AGACAGCCCC GCGTTCGCGG CGGCCTGGCG TTCGCAGGAC
GTCGACGAGC GCCAAGGCGG CCGGCGCGGG TTTCATCACC CGATGCGCGG CCTGGTCTAC
TTCGAGCAAC TCACGCTGGT ACCCCCGGCT GCACCGGGGA TGATGCTGGT GATGCTGCTG
CCGGAAACAC CCTGA
 
Protein sequence
MSIEPTQVSR EAELGAFLRT HRERLTPSDV GLPPGRRRRT PGLRREEVAQ LSGLSATWIT 
WLEQGRPVAM SVRALGSLAE ALRLSRAERA YLFALAGKPE PRQDAEPAVP VALLASVQAI
SGPAYLLDRQ WTARAWNAAA ADLFVGWLDA ASGERNLLRA MFLPTALQAL VEDWPHRAAR
LVAEFRVHSL RHAEDPPTRA LIERLMEDSP AFAAAWRSQD VDERQGGRRG FHHPMRGLVY
FEQLTLVPPA APGMMLVMLL PETP