| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0526 |
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| Symbol | |
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| ID | 4037315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 561160 |
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| End bp | 562653 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637975901 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_582681 |
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| Protein GI | 94309471 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00105915 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGATCA AGCGACTCGC AACCGACCGA CCCGATGGAC CCGACGGACT GCTGAAGGCC
CGCCGCAAAT GGATGGCGCA GGCGCTGAAA GTCAGTGCCG GTACGGTCGT ATTGACCATC
GCCGGGCCGC AGATCGCCTT TGGCGCCGGC ATTGTCGCGG TGCGGGTGTG GCCGGCCGAG
GACTACACGC GGGTAACCAT CGAGTCCGAC GAGCGCCTGG TGGCCGTGCA CCAGATGATC
CGCAACCCGG ACCGTCTCGT GGTCGACATC GACGGGCTCG ACCTGTCGCC GACGCTGCGC
GAACTCGTGG CGAAGATCAC GCCGAACGAT CCGTATATCC AGTCCGTGCG CGTGGGACAG
AACCGCCCGC GCGTGGTGCG GATGGTGTTC GACCTCAAGG AAGACGTCTC GCCGCAGGTG
TTCACGCTTG CGCCGATCAG CGACTACCGC AATCGTCTCG TATTCGACCT GTATCCGGTC
AATCCGCCCG ATCCGCTCTG GAAGCTCGTG CGTGATACCG AGGACAAGCA GCGGCGATTC
GCCGCCGCGC CGCCGCCTGC TGGTACCGAT GGTGTGTCCG GCGCGCCCGC TGGTGCGGAA
GAGGATGCAA TCGGCGCGAT TGTGCGCAAG TTCGAGGATC GGGACCAGCT TCCGTCGCCG
ACTACCGCTC CGCCACCCGC ATTGGCCGGC GTCAAGCCCA GGCCCCCCCT GCCGTCTCCC
GCGCCCGTGG CGCCGCCGCC GACGGCGCGG ACCAATCTGC CGCCACCCAG CGAATTCAAG
ATGCGCCGCC TGCTGACCGT GGCCATCGAT CCCGGCCATG GTGGTGAAGA CCCGGGGGCG
ATAGGTGCCG CGGGATCGCG CGAGAAGGAT GTCGTGCTGC AAATCGCCAC GCGCCTGCGC
GCGAAGATCG ACGCGCAGCC CAATATGCGC GCGATGATGA CGCGCGATTC GGACTTCTTC
GTGCCGCTCA ACGTGCGCGT GCAAAAGGCC CGCCGCGTGC AGGCGGACCT GTTCGTGTCG
ATTCACGCCG ACGCTTTCCT GTCTCCCGAG GCGCGTGGGG CATCGGTGTT CGCGTTGTCC
GAACGCGGCG CGTCAAGCTC GGCCGCGCGC TGGCTGGCCA ACAAGGAAAA CAATGCCGAT
CTGATCGGCG GTGCCAATAT GGGCAACAAG GATGCCCAGG TGGCGCGCGT GCTGCTGGAC
TTGTCCACAA CGGCACAGAT CAACGACAGC ATGCAGGTAG GCAGGTCCGT GCTGCAGGAG
ATCGGTGGGA TCAACAAGCT GCACAAGGGC AGCGTGGAGC AAGCGGGATT TGCGGTGCTC
AAGGCGCCGG ATATTCCGTC GATCCTGATC GAGACCGCGT TCATCAGCAA TCCCGAGGAA
GAGCGCAAGC TCAACGACGA CAGCCATCAG GAGCAACTGG CCAACGCCAT CCTGCGAGGC
ATCAAGGCGT ACTTCGCGCG CAATCCGCCG CTGTCGAAGA ATCCATCGGT GTGA
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| Protein sequence | MLIKRLATDR PDGPDGLLKA RRKWMAQALK VSAGTVVLTI AGPQIAFGAG IVAVRVWPAE
DYTRVTIESD ERLVAVHQMI RNPDRLVVDI DGLDLSPTLR ELVAKITPND PYIQSVRVGQ
NRPRVVRMVF DLKEDVSPQV FTLAPISDYR NRLVFDLYPV NPPDPLWKLV RDTEDKQRRF
AAAPPPAGTD GVSGAPAGAE EDAIGAIVRK FEDRDQLPSP TTAPPPALAG VKPRPPLPSP
APVAPPPTAR TNLPPPSEFK MRRLLTVAID PGHGGEDPGA IGAAGSREKD VVLQIATRLR
AKIDAQPNMR AMMTRDSDFF VPLNVRVQKA RRVQADLFVS IHADAFLSPE ARGASVFALS
ERGASSSAAR WLANKENNAD LIGGANMGNK DAQVARVLLD LSTTAQINDS MQVGRSVLQE
IGGINKLHKG SVEQAGFAVL KAPDIPSILI ETAFISNPEE ERKLNDDSHQ EQLANAILRG
IKAYFARNPP LSKNPSV
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