Gene Rmet_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0517 
Symbol 
ID4037306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp553873 
End bp554481 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content64% 
IMG OID637975892 
Productputative glycerol-3-phosphate acyltransferase PlsY 
Protein accessionYP_582672 
Protein GI94309462 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0870487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.527764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACC TGCTATTTGC CGTCATCGCT TACCTGATCG GATCGGTGTC ATTCGCCGTC 
GTGGTCAGCA AAGTCATGGG CCTACCCGAT CCGCACAGCT ATGGCTCCGG CAACCCCGGC
GCCACGAACG TGCTGCGCAC CGGCAACAAG AAGGCGGCCA TTTTCACGCT GATCGGCGAC
GCGCTGAAAG GCCTGGCGGC GGTGCTGCTG GCCAAGCACT TCGGCCCGGC ATACGGCGTG
GACGAGACCG GCATCGCGCT GGTGGCGCTG GCCGTGTTCC TCGGCCACCT GTTCCCGCTC
TACCATCGCT TCGCGGGCGG CAAGGGCGTG GCCACGGCCG CCGGCATCCT GTTCGCCATC
GATCCGATTC TCGGCGCCGG CACGCTGGCC ACGTGGCTGA TCATCGCGTT CTTCTTCCGC
TATTCGTCGC TGGCCGCGCT GATCTCGGCG ATCTTCGCGC CGTTCTTCTA TGTACTGATG
AATGGCGTGG ACATCATGGC CGGCGCGATC CTGGTGATCA GCGTGCTGCT GATCGCGCGC
CACCGCGCCA ATATCGCAAA GCTGCTGGCG GGCAAGGAAA GCCGGATCGG GGAGAAGAAG
AAGGTTTGA
 
Protein sequence
MINLLFAVIA YLIGSVSFAV VVSKVMGLPD PHSYGSGNPG ATNVLRTGNK KAAIFTLIGD 
ALKGLAAVLL AKHFGPAYGV DETGIALVAL AVFLGHLFPL YHRFAGGKGV ATAAGILFAI
DPILGAGTLA TWLIIAFFFR YSSLAALISA IFAPFFYVLM NGVDIMAGAI LVISVLLIAR
HRANIAKLLA GKESRIGEKK KV