| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0516 |
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| Symbol | |
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| ID | 4037305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 552515 |
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| End bp | 553798 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637975891 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_582671 |
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| Protein GI | 94309461 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00170031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.618297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTC GCATCGATAC CCTGTTTGGC CGCATCGCGC TGCTGATCGC GGCCGTGTTG
GTGATCAGCC ACTTTTCGTG GCTGGCCATC CTACGCATGG ACCGGCGCCA GCAGCAGATC
GACTATTCGG TCGAGCAGAT GATCTTCCAG CTCGACAGTA TCCAGCGGGC GCTCGATGCG
ACGCCGCCGT TGCCCCTGCC GAGCCTGGTG GAGGTGGCGG ATGCCTCCAC CGCCGACGAG
CACGCCTCCG TTCCGCAGGC CGGCCGGGCG CGCCGGCTGG TGGAGCAGTT CACGCGGCGC
CTGCCGCCGG GTACCGAGGT GCGGCTTGAG GACGAACTGT CCACGCCGCG GCTGTGGATC
AAGCTTCCCA AGCGTAATCG ATGGATCGCC ATGCCGATCT TGTTCGTGCA CAACCCGCCG
CCGGACAATC GACTGTTGCC GGGCGTGGTG CTGGTGGTAG GGATAGCGAT CATCTTCGCA
TTGCTGATCG CGTGGCAGAT CCAGCGCCCT GTGCGGGATA TGGCCGAGGC GGCGGAGAAG
CTGTCGCGCC AGCAACTGGT GTCGCCGCTG CGCGAGCGCG GACCGCATGA ACTGCGGCAA
CTGATCGAGC GTTTCAATCG CATGGTCGCA GACCTCGTGC GCATCGATCA GGAACGCAAC
ACAATGCTGG CCGGCATCGC GCACGACCTG AAAACCCCGC TCGCGCGCCT ACGATTGCGT
GCGGAGATGC TGTCGGATCC GAAGGCCGCT GCCGGCGTGA CGCGCGATGT GGAGTCGATG
TCGGCGATCG TCGAGCAGTT CCTGACCTTC GCGCAAAGCA GCGAGCCTAC CGCGCGGCCC
GTGCCGGTGG ACAAGCGTAT CGGCGAACTG GCGGCATCCT TGCAGGAGCA GGACAGGAAG
GTGGTGCTGG AACTGAACGC GGGCGATGGC TTCCGCATGA TCGCCACTCA GCTCGACCGG
ATCATCGGCA ATCTCGTCGA CAACGCCTAC GCCTACGGTG AGCCGCCGGT GTGTGTGGCC
ACGAGCCGCA CGCAGGAAGG CTGGAAGCTG ATTGTTGAGG ATGAGGGACC GGGGATTCCG
GATGACGCGA TCGAACGCGT GACGATGCCG TTCGTGCGGC TCGATCCGGC ACGTGGCGGC
AATGCGCATT CGGGATTGGG CCTGGCGATC GTCGATCGCC TGGTGCGGCA GGCCGGCGGA
CGCCTGTCCA TTGCCAACCG CGAGGAAGGC GGCCTGCGCG TGGAAATGGT GTTTCCGTTC
GCGGCCATGG CGCAGGCGGC TTGA
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| Protein sequence | MKLRIDTLFG RIALLIAAVL VISHFSWLAI LRMDRRQQQI DYSVEQMIFQ LDSIQRALDA
TPPLPLPSLV EVADASTADE HASVPQAGRA RRLVEQFTRR LPPGTEVRLE DELSTPRLWI
KLPKRNRWIA MPILFVHNPP PDNRLLPGVV LVVGIAIIFA LLIAWQIQRP VRDMAEAAEK
LSRQQLVSPL RERGPHELRQ LIERFNRMVA DLVRIDQERN TMLAGIAHDL KTPLARLRLR
AEMLSDPKAA AGVTRDVESM SAIVEQFLTF AQSSEPTARP VPVDKRIGEL AASLQEQDRK
VVLELNAGDG FRMIATQLDR IIGNLVDNAY AYGEPPVCVA TSRTQEGWKL IVEDEGPGIP
DDAIERVTMP FVRLDPARGG NAHSGLGLAI VDRLVRQAGG RLSIANREEG GLRVEMVFPF
AAMAQAA
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