| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0512 |
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| Symbol | |
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| ID | 4037301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 543591 |
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| End bp | 546893 |
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| Gene Length | 3303 bp |
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| Protein Length | 1100 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637975887 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_582667 |
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| Protein GI | 94309457 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.196913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGT CGGCCACCTT CATCCATCGC CCGGTTGCCA CCGCGCTGCT GACCATCGGC
ATTCTGCTGG CGGGCATCGC GGCGTTCCGG CTGCTGCCGG TCTCGCCGCT GCCGCAGGTG
GACTTCCCCA CCATCTCGGT GTCTGCGTCG CTGCCCGGCG CCAGCCCCGA GACGATGGCC
GCCACGGTGG CCACGCCGCT CGAACGCGCG CTGGGGACGA TTGCCGGTGT CACGGAAATC
ACGTCGAACA GCTCGCTCGG CTCCACACGC GTGACGCTGC AGTTCGACCT GTCGCGCAAC
ATCGACGGCG CGGCCCGCGA CGTGCAGGCC GCGATCAATG CATCGCGCGC CACGCTGCCC
ACGAGCCTGC CGAACAACCC GACCTATCGC AAGGTCAACC CGGCCGACGC GCCGATCATG
ATCATCGGCC TGACCTCGCA GACGATGTCA CGTGGCCAGC TCTACGATGC GGCGTCGACG
ATCCTCGCGC AGAAGCTCTC GCAGGTGGAA GGCGTCGGGC AGGTGACCAT CGGCGGCTCT
TCGCTGCCGG CTGTGCGCGT GGAGCTGAAT CCCACGTCGC TGAACAAGTA CGGCATCTCG
CTGGAAGACG TCCGCAACAC CATCAGCGCC ACCAACGCCA ACCGGCCGCT CGGCGTGCTG
GAGAACAGCA ACAACGCGTG GCAGGTCTAT GCCAACGACC AGGCGATGGC GGCCAAGGAC
TACATGCCGC TGATCATCCG CTACGCCACG CCGGGCACGT ACTCGTCCGC GTCGGCCGGC
GCGCTGATCG CCAGCACCGC CAACGCCGCC GCCGGCGGCA ATGTCAGCAC GAAGACCGTC
AACGGTGTCA CCACGACCAC CATCACCACC AGCAGCGGCA CCACGACGAT CACCACCGGA
GCCACCGGCG GCAGCAACGG CGCGAAGGGG CCAAACGGCT TCGCGGTGCC GATCCGCCTG
CAGGACGTGG CCAATGTGGT CGACTCGGTA CAGGACATCC GCAATGCCGG CTCTGCCAAC
GGCAAGCCAT CGGTGCTGCT GGTGCTAAAC CGCTCGCCCG GCGCCAACAT CATCGAGACC
GTGGACCGCG TCAACGACAT CCTGCCGCAG TTGGGCAAGA TGATCCCGGC CGCGATCTCG
ATGGACGTGA TGATGGACCG CACACCCACC ATCCGCGCCT CGCTGCGCGA GGTGGAACAG
ACGCTGATCA TCTCGGTGGC TCTGGTGGTC ATGGTCGTGT TCCTGTTCCT GCGCAACGTG
CGGGCCACGC TGATTCCGAG TGTGGCGGTA CCGGTATCGC TGGTCGGCAC ATTCTCGGTG
ATGTACCTGG CCGGGTTCTC GCTGAACAAC CTTTCGCTGA TGGCGCTGAC CATCGCCACG
GGCTTTGTGG TCGACGATGC GATTGTGGTG CTGGAGAACA TCTCGCGCCA TATTGAGGAG
GGCATGAAGC CGCTGGCCGC CGCCTTGCGC GGCGCGCGCG AGGTCGGCTT CACGGTGCTG
TCGATGAGTC TCTCGCTGAT CGCCGTGTTC ATCCCGCTGC TGCTGATGGG TGGCATCGTC
GGCCGACTGT TCCAGGAGTT CGCGATCACG CTGTCGGTCG CCATCCTGGT GTCGCTGGTC
GTGTCGCTGA CCACCACGCC GATGATGTGC GCGCGGCTGC TGCGCCCAGT GCACGAAGAA
TCCCAGGGCC GTTTTCATCG CGCGACCGAG CACGTCTTTA CATGGATGCA GCAGGCCTAC
GCGCGCACGC TGGGCGCGGC GTTGCGCCAT AGCACGTTGG TCTGGATCGT TCTGCTGGCC
ACGGTGGCAC TGAACGTCTG GCTCTACGTG ATCGTGCCGA AGGGCTTCTT CCCGCAGCAG
GACACGGGCC GCCTGATCGG CTTCATCCGC GCGGACCAGG CCACGTCGTT CCAGGCGATG
CGCACCAAGC TCGACAACTT TATCCAGATC GTCCAGACCG ATCCGGCCGT GGTCAACGTG
GTGGGCTTCA CGGGCGGCTC GCAGCGCAAC ACGGGACAGA TGTTCGTCAC GCTGAAGCCG
CTGTCCGAGC GCAAGGAATC CGCCGATGCG ATCATCGCGC GGCTGCGTGG CAAGCTGGCC
AAGGAGCCTG GCGCCAGCCT GTTCCTGCAG TCGGTGCAGG ATATCCGTGT CGGTGGGCGA
CAGAGCAGTT CGCAATACCA GTTCACGCTG CAGTCTGATG ACCTGAACGT GCTGCGCGAC
TGGGAGCCAA AGGTTCGCGC CGCGATTTCG AACATCAAGG GCATCGAGGA CGTCGACACC
GATACCAATG ACAAGGGCCT GCAAACGTCG GTGATCATCG ACCGCGACAC CGCGTCGAAG
CTCGGCGTCA GCGCGCAGCA AATCGACGCG ATCCTCAACG ATGCCTTCGG GCAGCGCCTG
GTCTCGACGA TCTACCACCC GCTCAACCAG TACCGCGTGG TGATGGAGCT CAGTTCCGAG
TATCTGCAGG GGCCGCACGC GCTGCAGGAT GTCTATGTCG TCACCGGCGG TGGCAAGCGC
GTGCCGCTCG CGGCCTTCAC GCGTGTGATG CCGACCAGCA CGCCACTCGG CGTGAACCAC
CAGGGCCAGT TCGCGGCGTC GACGATCTCG TTCAACCTGG CCGAAGGCTA TTCGCTGTCG
CAGGCCACCG ACGCGATCAA GGATGCGCTC GCGCGGATCG GCGCGCCGGA GACGTTGCAG
GCCAACTTCG CGGGTGGCGC CAAGGCGTTC CAGGATTCGC TCAAGAGCCA GCCGATCCTG
ATTCTGGCGG CGATCATCAC GATCTACATC GTGCTGGGCA TCCTGTACGA AAGCTACGTG
CATCCGCTGA CGATCCTGTC GACGCTGCCG TCGGCGGGCG TGGGCGCGCT GCTGGCCCTG
CTGCTGTTCA AGACCGAGTT CAGCATCATC GCGCTGATCG GCGTGATCCT GCTGATCGGC
ATCGTGAAGA AGAACGCGAT CATGATGATC GACTTCGCGA TCGACGCCGA GCGGCGTGAT
GGCCTGAGCC CGCGCGACGC GATCTACCGT GCCTGCCTGC TCCGTTTCCG TCCGATCATG
ATGACCACGA TGGCAGCGAT GCTGGGCGCG ATTCCGCTGG CACTGGGCCA CGGCGATGGC
GCCGAACTGC GCGCGCCACT CGGTATCTCG ATCGTTGGCG GGCTGCTCGT CAGCCAGTTG
CTGACGCTGT ACACCACGCC TGTGGTCTAC CTCACGCTGG ATCGCTGGCG CCTCAAGGTC
AAGGCCTGGC GCGAGCGTCG TCGCACCCAG GCAAGCGGCA CCACGCCGCA CCTCGAACAC
TGA
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| Protein sequence | MNLSATFIHR PVATALLTIG ILLAGIAAFR LLPVSPLPQV DFPTISVSAS LPGASPETMA
ATVATPLERA LGTIAGVTEI TSNSSLGSTR VTLQFDLSRN IDGAARDVQA AINASRATLP
TSLPNNPTYR KVNPADAPIM IIGLTSQTMS RGQLYDAAST ILAQKLSQVE GVGQVTIGGS
SLPAVRVELN PTSLNKYGIS LEDVRNTISA TNANRPLGVL ENSNNAWQVY ANDQAMAAKD
YMPLIIRYAT PGTYSSASAG ALIASTANAA AGGNVSTKTV NGVTTTTITT SSGTTTITTG
ATGGSNGAKG PNGFAVPIRL QDVANVVDSV QDIRNAGSAN GKPSVLLVLN RSPGANIIET
VDRVNDILPQ LGKMIPAAIS MDVMMDRTPT IRASLREVEQ TLIISVALVV MVVFLFLRNV
RATLIPSVAV PVSLVGTFSV MYLAGFSLNN LSLMALTIAT GFVVDDAIVV LENISRHIEE
GMKPLAAALR GAREVGFTVL SMSLSLIAVF IPLLLMGGIV GRLFQEFAIT LSVAILVSLV
VSLTTTPMMC ARLLRPVHEE SQGRFHRATE HVFTWMQQAY ARTLGAALRH STLVWIVLLA
TVALNVWLYV IVPKGFFPQQ DTGRLIGFIR ADQATSFQAM RTKLDNFIQI VQTDPAVVNV
VGFTGGSQRN TGQMFVTLKP LSERKESADA IIARLRGKLA KEPGASLFLQ SVQDIRVGGR
QSSSQYQFTL QSDDLNVLRD WEPKVRAAIS NIKGIEDVDT DTNDKGLQTS VIIDRDTASK
LGVSAQQIDA ILNDAFGQRL VSTIYHPLNQ YRVVMELSSE YLQGPHALQD VYVVTGGGKR
VPLAAFTRVM PTSTPLGVNH QGQFAASTIS FNLAEGYSLS QATDAIKDAL ARIGAPETLQ
ANFAGGAKAF QDSLKSQPIL ILAAIITIYI VLGILYESYV HPLTILSTLP SAGVGALLAL
LLFKTEFSII ALIGVILLIG IVKKNAIMMI DFAIDAERRD GLSPRDAIYR ACLLRFRPIM
MTTMAAMLGA IPLALGHGDG AELRAPLGIS IVGGLLVSQL LTLYTTPVVY LTLDRWRLKV
KAWRERRRTQ ASGTTPHLEH
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