Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0494 |
Symbol | |
ID | 4037283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 520891 |
End bp | 523968 |
Gene Length | 3078 bp |
Protein Length | 1025 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637975869 |
Product | SNF2-like protein |
Protein accession | YP_582649 |
Protein GI | 94309439 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGTCT CCCTCTGCAG CCCAGGTAAA TGTCGCAAAG GCACCATTGT AAGCCGCGCG TCCTTGCGTG CCAACGAAGG GCGGCGGATA GAGCGTTCTA CAATCGCACC TTCCGACCTT CCACCGTTCC GCAGCCGCGT GTCCCAACCC GAACTCCCCG TCGAGCGTGC CGATCATGAT GCCGATTCCG TCGCGGATGG CGGCTGGCAG GCCACGCTTT GCGCACTTGA GGCATTGGCG GGGGGCGTGG ATGAAGCCGC CGGCACCGGC GACGGACGCC GCCTGCTCTG GGCGCTGACC CTCGATGCAG ACGGTGTGGT CGGGACGATC GAGCCGCTGG AGCAGACTCA CGGGGCGCGT GGCTGGAGCA AGCCCAGGCC GGTGCCGCTG GCCCGTGTGG CCGAGGACGA CACCCTGCCA CAGTGGGATG TCCGCGTCGC CCGTGCCATC CGCCGGGACG CATCGCGCAA CCGGCGTCAC GTGCTGGACC GCGCCGCCGC CGTGGTGGCG CTGGTGGGGC ATCCGGCCGT GGTGCTGTCC CATGCGCCGA CGGTGCCGAT GGAAGTGGTC GAGTCCGCGC CTTCGCTCGA GGCGGTGCGC GAGGGCGACC GCTACGTGCT GCGGATCGTG CCGCCACTGC GCGAGGCGCT GGCCATGGAG GACTTCCTGC CCGCCGCCGC GCGTCAGGAA GCCGAGTCGC TACGCCAGAT CACCGTGCTG CAGGATGGTC CGCGCCGGCT GCGCGTGGTC CGCTTCACGC CGGCGCAGCA GGGCGCGGCC AAGCTCATCG CGGGCGGACT CTCCGTGCCG GCCGATGCCC AGGCGCGGCT CGACAGCACG TTGCGCGCGC TGGCGGGCCA CTTCCAGATT CACGCCGACA GCTCGGGCGA GGCACGCGAG CGCGACCCGG AGTCGCGGCT GCGTGCCGAG GTGGCGCCGG TTGGGCGCGG CATCAGCCTG CGGCTGGTGG TGACGCCGCT TGGCGTGCTC GGGCCCAGGC TCGCGCCGGG CCACGGCCGC GCGCAACTGA TGGCGACGAT TGGCGGCGAG ACGCACGTGA CGTACCGCGA TCTCGATGCC GAGCACGCGC ACGTGGCCGA GGTATTCGAG GCGTTGCCGT TCCTCGTGCA GCAGGCCCCC GCAGGCGGCG AGCACACCTG GACGCTGGAC GATCCCGAGG ACGCGCTGAC CGCCATCGAG GTGTTGCCCG GACTGGCCGG CGTGATCGAT CTCGAATGGC CGCGTGGCCG TGAGTTGCGC GTCTTGCCGG CTGATATCGC GCAGCTTGCC GTCAGCGTGG AGACCGGCAG CGAATGGTTC AAGCTCGTGG GCGAACTGCG CGTGGCCGAG GGGCTGGTGA TCTCGCTCGA AAAACTGGTC GCGTGGGCGC ACGGCCATGC GGGCCGCTTC ATGCCGATGG CGCACGGCGT CTACGTGGCG CTGACCCGCC AGTTGCGAGA CCGGCTGCGC GATCTGGCCG GCGTGGGCGA TGGCGTCCGG GACGGCATCC GTGTGCCGCT GGTGGCCGCG CCCTGGCTCG ACGACGTGCT GGCTGGCGCC GGTATCGACC CCGACGCGCA CTTCCGCACC CGCGTGAAGC AACTGCGTGC CGCGCGTGGT CACGATGCGC CGGTGCCGCC GACGCTGGTG GCGGAGTTGC GGCCGTATCA GCTCGAAGGC TTCCGCTGGA TGATGTCGCT GGCAGAAGCC GGCTTTGGCG CATGCCTGGC CGATGACATG GGCCTGGGCA AGACGCTGCA GTCGCTGGCC GTGCTGCTGG CGCGGGCGGC GGGTGGCCCG GCCCTGGTTG TCGCGCCAAC CTCGGTCTGC GGCAACTGGG CCACAGAGGC GCGTCGCTTC GCCCCGGCGT TGCGGGTCCA CGTCTATGCC GATGGCGACC GCGAGGCGAT CGTCGGGCAG GCCGCCGCGC ACGATCTGGT GATCGTCTCG TACAACCTGC TGCAACAGGC CCGCAAGGCT TTCTGCGACC GTCACTGGCA TACGGTCGTG GCTGACGAGG CGCAGTCGTT CAAGAATCCG TCTTCGCGCC GCGCACAGGC GATGTTCGCG CTGCCGGCCG ATTGCCGCAT CGCGCTTTCC GGTACACCAG TCGAAAACCG TCTTGCCGAA CTCTGGGCCG TGATGCGTTT CTGCGTGCCG GGGTTGCTTG GCTCGCTGGC ACGCTTCAAC GAGCATTTCG CGAATCCGAT CGAACGCAGC GGCGCACGCG ATCCGCGTCA GCGGCTCCGG CGCATGATTG CCCCGTTCGT GTTGCGCCGG ACCAAGGCGC AGGTCCTCGA CGAATTGCCG CCGCGCACGG AACTGGTGAT TCGCGTCACG CCCGAGCCCA CGGAAGCCGC CCACTACGAG GCGCTGCGCC GGCAGGCGCT TTCCGAGGCG GAACGGGCGC TGCTGCGTCC GCGCAAGGAC AAGAAGGCGC CCGCTGCCAT GACCGAGCCC GAGGCGCGCA TCCATGTGCT TGCCCAGTTG ATGCGGATGC GCCGTGCCGC GTGCGATCCG CGACTGGTCA CGCCCGATGT AGGGCAGCCC GGCGCCAAGG TGCGGGCATT CGCCGAACTG GCGGCCACGC TGGCCGCCAA CGGGCATAAG ACGCTGGTCT TCAGCCAGTT CGTCGATTTC CTGCAGATGC TGCGGCAGGC GCTCGTTGAC GCGGGTCTGG CGTGGCAGTA CCTCGACGGC GCGACACCGG CCGGCGAGCG CACGCGACGC GTGGCGGCAT TTCAGGCGGG CGAGGGCGAT GTGTTCCTGA TCAGCCTGAA GGCAGGCGGG TTCGGCCTGA ACCTGACCGC CGCCGACTAC ATCGTGATTG CCGATCCCTG GTGGAACCCG GCTGCCGAGG ATCAGGCGAT GGGCCGCGCG CACCGCATCG GCCAGCAGCG GCCGGTCACG GTCTACCGGC TGATCGCGGC CGGCACGATC GAGGAGCGCA TCGTCGATCT GCACCAGGGC AAGCGGGCGC TGGCGGACGG CGTGCTCGAC GCGATGGATG GCGAGGCGAT CGGCCGCGAT GTGCCGTTGC CCGATGTCGA TGAACTGGTA GGGCTGCTGC GGCGATGA
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Protein sequence | MVVSLCSPGK CRKGTIVSRA SLRANEGRRI ERSTIAPSDL PPFRSRVSQP ELPVERADHD ADSVADGGWQ ATLCALEALA GGVDEAAGTG DGRRLLWALT LDADGVVGTI EPLEQTHGAR GWSKPRPVPL ARVAEDDTLP QWDVRVARAI RRDASRNRRH VLDRAAAVVA LVGHPAVVLS HAPTVPMEVV ESAPSLEAVR EGDRYVLRIV PPLREALAME DFLPAAARQE AESLRQITVL QDGPRRLRVV RFTPAQQGAA KLIAGGLSVP ADAQARLDST LRALAGHFQI HADSSGEARE RDPESRLRAE VAPVGRGISL RLVVTPLGVL GPRLAPGHGR AQLMATIGGE THVTYRDLDA EHAHVAEVFE ALPFLVQQAP AGGEHTWTLD DPEDALTAIE VLPGLAGVID LEWPRGRELR VLPADIAQLA VSVETGSEWF KLVGELRVAE GLVISLEKLV AWAHGHAGRF MPMAHGVYVA LTRQLRDRLR DLAGVGDGVR DGIRVPLVAA PWLDDVLAGA GIDPDAHFRT RVKQLRAARG HDAPVPPTLV AELRPYQLEG FRWMMSLAEA GFGACLADDM GLGKTLQSLA VLLARAAGGP ALVVAPTSVC GNWATEARRF APALRVHVYA DGDREAIVGQ AAAHDLVIVS YNLLQQARKA FCDRHWHTVV ADEAQSFKNP SSRRAQAMFA LPADCRIALS GTPVENRLAE LWAVMRFCVP GLLGSLARFN EHFANPIERS GARDPRQRLR RMIAPFVLRR TKAQVLDELP PRTELVIRVT PEPTEAAHYE ALRRQALSEA ERALLRPRKD KKAPAAMTEP EARIHVLAQL MRMRRAACDP RLVTPDVGQP GAKVRAFAEL AATLAANGHK TLVFSQFVDF LQMLRQALVD AGLAWQYLDG ATPAGERTRR VAAFQAGEGD VFLISLKAGG FGLNLTAADY IVIADPWWNP AAEDQAMGRA HRIGQQRPVT VYRLIAAGTI EERIVDLHQG KRALADGVLD AMDGEAIGRD VPLPDVDELV GLLRR
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