Gene Rmet_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0494 
Symbol 
ID4037283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp520891 
End bp523968 
Gene Length3078 bp 
Protein Length1025 aa 
Translation table11 
GC content70% 
IMG OID637975869 
ProductSNF2-like protein 
Protein accessionYP_582649 
Protein GI94309439 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTCT CCCTCTGCAG CCCAGGTAAA TGTCGCAAAG GCACCATTGT AAGCCGCGCG 
TCCTTGCGTG CCAACGAAGG GCGGCGGATA GAGCGTTCTA CAATCGCACC TTCCGACCTT
CCACCGTTCC GCAGCCGCGT GTCCCAACCC GAACTCCCCG TCGAGCGTGC CGATCATGAT
GCCGATTCCG TCGCGGATGG CGGCTGGCAG GCCACGCTTT GCGCACTTGA GGCATTGGCG
GGGGGCGTGG ATGAAGCCGC CGGCACCGGC GACGGACGCC GCCTGCTCTG GGCGCTGACC
CTCGATGCAG ACGGTGTGGT CGGGACGATC GAGCCGCTGG AGCAGACTCA CGGGGCGCGT
GGCTGGAGCA AGCCCAGGCC GGTGCCGCTG GCCCGTGTGG CCGAGGACGA CACCCTGCCA
CAGTGGGATG TCCGCGTCGC CCGTGCCATC CGCCGGGACG CATCGCGCAA CCGGCGTCAC
GTGCTGGACC GCGCCGCCGC CGTGGTGGCG CTGGTGGGGC ATCCGGCCGT GGTGCTGTCC
CATGCGCCGA CGGTGCCGAT GGAAGTGGTC GAGTCCGCGC CTTCGCTCGA GGCGGTGCGC
GAGGGCGACC GCTACGTGCT GCGGATCGTG CCGCCACTGC GCGAGGCGCT GGCCATGGAG
GACTTCCTGC CCGCCGCCGC GCGTCAGGAA GCCGAGTCGC TACGCCAGAT CACCGTGCTG
CAGGATGGTC CGCGCCGGCT GCGCGTGGTC CGCTTCACGC CGGCGCAGCA GGGCGCGGCC
AAGCTCATCG CGGGCGGACT CTCCGTGCCG GCCGATGCCC AGGCGCGGCT CGACAGCACG
TTGCGCGCGC TGGCGGGCCA CTTCCAGATT CACGCCGACA GCTCGGGCGA GGCACGCGAG
CGCGACCCGG AGTCGCGGCT GCGTGCCGAG GTGGCGCCGG TTGGGCGCGG CATCAGCCTG
CGGCTGGTGG TGACGCCGCT TGGCGTGCTC GGGCCCAGGC TCGCGCCGGG CCACGGCCGC
GCGCAACTGA TGGCGACGAT TGGCGGCGAG ACGCACGTGA CGTACCGCGA TCTCGATGCC
GAGCACGCGC ACGTGGCCGA GGTATTCGAG GCGTTGCCGT TCCTCGTGCA GCAGGCCCCC
GCAGGCGGCG AGCACACCTG GACGCTGGAC GATCCCGAGG ACGCGCTGAC CGCCATCGAG
GTGTTGCCCG GACTGGCCGG CGTGATCGAT CTCGAATGGC CGCGTGGCCG TGAGTTGCGC
GTCTTGCCGG CTGATATCGC GCAGCTTGCC GTCAGCGTGG AGACCGGCAG CGAATGGTTC
AAGCTCGTGG GCGAACTGCG CGTGGCCGAG GGGCTGGTGA TCTCGCTCGA AAAACTGGTC
GCGTGGGCGC ACGGCCATGC GGGCCGCTTC ATGCCGATGG CGCACGGCGT CTACGTGGCG
CTGACCCGCC AGTTGCGAGA CCGGCTGCGC GATCTGGCCG GCGTGGGCGA TGGCGTCCGG
GACGGCATCC GTGTGCCGCT GGTGGCCGCG CCCTGGCTCG ACGACGTGCT GGCTGGCGCC
GGTATCGACC CCGACGCGCA CTTCCGCACC CGCGTGAAGC AACTGCGTGC CGCGCGTGGT
CACGATGCGC CGGTGCCGCC GACGCTGGTG GCGGAGTTGC GGCCGTATCA GCTCGAAGGC
TTCCGCTGGA TGATGTCGCT GGCAGAAGCC GGCTTTGGCG CATGCCTGGC CGATGACATG
GGCCTGGGCA AGACGCTGCA GTCGCTGGCC GTGCTGCTGG CGCGGGCGGC GGGTGGCCCG
GCCCTGGTTG TCGCGCCAAC CTCGGTCTGC GGCAACTGGG CCACAGAGGC GCGTCGCTTC
GCCCCGGCGT TGCGGGTCCA CGTCTATGCC GATGGCGACC GCGAGGCGAT CGTCGGGCAG
GCCGCCGCGC ACGATCTGGT GATCGTCTCG TACAACCTGC TGCAACAGGC CCGCAAGGCT
TTCTGCGACC GTCACTGGCA TACGGTCGTG GCTGACGAGG CGCAGTCGTT CAAGAATCCG
TCTTCGCGCC GCGCACAGGC GATGTTCGCG CTGCCGGCCG ATTGCCGCAT CGCGCTTTCC
GGTACACCAG TCGAAAACCG TCTTGCCGAA CTCTGGGCCG TGATGCGTTT CTGCGTGCCG
GGGTTGCTTG GCTCGCTGGC ACGCTTCAAC GAGCATTTCG CGAATCCGAT CGAACGCAGC
GGCGCACGCG ATCCGCGTCA GCGGCTCCGG CGCATGATTG CCCCGTTCGT GTTGCGCCGG
ACCAAGGCGC AGGTCCTCGA CGAATTGCCG CCGCGCACGG AACTGGTGAT TCGCGTCACG
CCCGAGCCCA CGGAAGCCGC CCACTACGAG GCGCTGCGCC GGCAGGCGCT TTCCGAGGCG
GAACGGGCGC TGCTGCGTCC GCGCAAGGAC AAGAAGGCGC CCGCTGCCAT GACCGAGCCC
GAGGCGCGCA TCCATGTGCT TGCCCAGTTG ATGCGGATGC GCCGTGCCGC GTGCGATCCG
CGACTGGTCA CGCCCGATGT AGGGCAGCCC GGCGCCAAGG TGCGGGCATT CGCCGAACTG
GCGGCCACGC TGGCCGCCAA CGGGCATAAG ACGCTGGTCT TCAGCCAGTT CGTCGATTTC
CTGCAGATGC TGCGGCAGGC GCTCGTTGAC GCGGGTCTGG CGTGGCAGTA CCTCGACGGC
GCGACACCGG CCGGCGAGCG CACGCGACGC GTGGCGGCAT TTCAGGCGGG CGAGGGCGAT
GTGTTCCTGA TCAGCCTGAA GGCAGGCGGG TTCGGCCTGA ACCTGACCGC CGCCGACTAC
ATCGTGATTG CCGATCCCTG GTGGAACCCG GCTGCCGAGG ATCAGGCGAT GGGCCGCGCG
CACCGCATCG GCCAGCAGCG GCCGGTCACG GTCTACCGGC TGATCGCGGC CGGCACGATC
GAGGAGCGCA TCGTCGATCT GCACCAGGGC AAGCGGGCGC TGGCGGACGG CGTGCTCGAC
GCGATGGATG GCGAGGCGAT CGGCCGCGAT GTGCCGTTGC CCGATGTCGA TGAACTGGTA
GGGCTGCTGC GGCGATGA
 
Protein sequence
MVVSLCSPGK CRKGTIVSRA SLRANEGRRI ERSTIAPSDL PPFRSRVSQP ELPVERADHD 
ADSVADGGWQ ATLCALEALA GGVDEAAGTG DGRRLLWALT LDADGVVGTI EPLEQTHGAR
GWSKPRPVPL ARVAEDDTLP QWDVRVARAI RRDASRNRRH VLDRAAAVVA LVGHPAVVLS
HAPTVPMEVV ESAPSLEAVR EGDRYVLRIV PPLREALAME DFLPAAARQE AESLRQITVL
QDGPRRLRVV RFTPAQQGAA KLIAGGLSVP ADAQARLDST LRALAGHFQI HADSSGEARE
RDPESRLRAE VAPVGRGISL RLVVTPLGVL GPRLAPGHGR AQLMATIGGE THVTYRDLDA
EHAHVAEVFE ALPFLVQQAP AGGEHTWTLD DPEDALTAIE VLPGLAGVID LEWPRGRELR
VLPADIAQLA VSVETGSEWF KLVGELRVAE GLVISLEKLV AWAHGHAGRF MPMAHGVYVA
LTRQLRDRLR DLAGVGDGVR DGIRVPLVAA PWLDDVLAGA GIDPDAHFRT RVKQLRAARG
HDAPVPPTLV AELRPYQLEG FRWMMSLAEA GFGACLADDM GLGKTLQSLA VLLARAAGGP
ALVVAPTSVC GNWATEARRF APALRVHVYA DGDREAIVGQ AAAHDLVIVS YNLLQQARKA
FCDRHWHTVV ADEAQSFKNP SSRRAQAMFA LPADCRIALS GTPVENRLAE LWAVMRFCVP
GLLGSLARFN EHFANPIERS GARDPRQRLR RMIAPFVLRR TKAQVLDELP PRTELVIRVT
PEPTEAAHYE ALRRQALSEA ERALLRPRKD KKAPAAMTEP EARIHVLAQL MRMRRAACDP
RLVTPDVGQP GAKVRAFAEL AATLAANGHK TLVFSQFVDF LQMLRQALVD AGLAWQYLDG
ATPAGERTRR VAAFQAGEGD VFLISLKAGG FGLNLTAADY IVIADPWWNP AAEDQAMGRA
HRIGQQRPVT VYRLIAAGTI EERIVDLHQG KRALADGVLD AMDGEAIGRD VPLPDVDELV
GLLRR