Gene Rmet_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0479 
Symbol 
ID4037268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp507316 
End bp508326 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content54% 
IMG OID637975854 
ProductABC transporter ATP-binding protein 
Protein accessionYP_582634 
Protein GI94309424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.990168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCG TCCAATTTCC CCCATCAACC AATCAGAGGC AGGACGCAAG CGCAGTTCAG 
TGTGAGTCGA GCATCGTGGT TGTAGGCGCG AACGGCGCAG GGAAGACGCG TCTCGGTACT
TGGATAGAGT TCTCAGGCCC CGACCAACGG AGGGTCCATC GGGTTGCCGC ACAGCGTGCA
TTGAGTTTTC CCCCAAACAT CAGCCCGACC AATACGGCGA ATGCAGCGTT AGATTTTACT
TATGGGTTAA ACGCTCACCA ATCCGGCATC CCTCAGGATC AATTTGAACA GAATGGCGTA
GGGGTCCGGA AAGGATATCG ATGGAATAAC TCGCCAGAGA CGTTTCTCCT GAATGACTAT
GCAGCCCTCG CCGTCCTGCT TTTCTCAGAG AATTACGACC AGACGCTAGA TTATGTTGCG
CGAGTTCGTC AGTCGCCGGA GCGCCTTGAC CCGCCAATCA CCAAGTTGGA CAAGGTGAAG
GAAATCTGGG AGGAGGTTCT GCCACATAGA AAACTTGTGC TCAAAAGTAG TGGTGTCTCG
GCAAAAGCTC CTGGTGATGC TGAGGAGTAC GCCGCCAGCT TGATGAGCGA TGGGGAGCGT
GTCGTCTTCT ACCTTATCGG TCAATGCGTT TGTGCTCGCC CCGGGTCTGT TGTTGTCATT
GACGAGCCAG AGATTCACCT GCACAAAGCG ATTCAGACTA GGCTGTGGGA TGCTATCGAG
GTGGCACGAC CAGACTGCAC TTTCGTATAT CTCACGCATG ATCTTACTTT CGCATCTGAA
CGGACCGGCT CAACGAAAGT CTGTCTCAAG GGGTACGATG GCGTTGCGTT TGACTGGTAC
GAAATACCCC AGACCGAAGG CATCCCAGAA GACATCTTGC TGGAAGTGCT CGGAAGCCGG
AAGCCAGTCC TCTTCGTAGA GGGTGTGCAG GGGGGGTGTC AGAATTTCCG TGTTCAAGGC
GGGTTGAGAA TCACACGGAT GGTCGAACGA ATCGATCCTG GTAGAGGATA G
 
Protein sequence
MKTVQFPPST NQRQDASAVQ CESSIVVVGA NGAGKTRLGT WIEFSGPDQR RVHRVAAQRA 
LSFPPNISPT NTANAALDFT YGLNAHQSGI PQDQFEQNGV GVRKGYRWNN SPETFLLNDY
AALAVLLFSE NYDQTLDYVA RVRQSPERLD PPITKLDKVK EIWEEVLPHR KLVLKSSGVS
AKAPGDAEEY AASLMSDGER VVFYLIGQCV CARPGSVVVI DEPEIHLHKA IQTRLWDAIE
VARPDCTFVY LTHDLTFASE RTGSTKVCLK GYDGVAFDWY EIPQTEGIPE DILLEVLGSR
KPVLFVEGVQ GGCQNFRVQG GLRITRMVER IDPGRG