| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0462 |
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| Symbol | |
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| ID | 4037251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 490734 |
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| End bp | 492431 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637975837 |
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| Product | major facilitator transporter |
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| Protein accession | YP_582617 |
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| Protein GI | 94309407 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.920315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACG CGCAAAACGT GGCAATGCCT GGCGGCAAAG CCCACAATGC GCCGATGACG
CGCGAGGAAA AGAAGGTCAT TCTGGCCTCG TCGCTCGGCA CGGTGTTCGA GTGGTACGAC
TTTTATCTAT ACGGTTCGCT GGCGGCGGTG ATCGCCAAGC AGTTCTTCGC GGGCCTCGAC
CCCACTTCCG CATTTATCTT CGCCCTGCTG GCGTTCGCGG CAGGCTTCAT CGTGCGTCCG
TTCGGCGCAC TGGTGTTCGG CCGTCTCGGC GACATGATCG GCCGCAAGTA CACCTTCCTG
GTGACAATCC TGATCATGGG CTTGTCGACA TTCATCGTCG GCCTATTGCC CGGCTACGCC
ACGATCGGCT GGGCAGCACC GATCATCCTG ATTGCACTGC GTATGTTGCA GGGCCTGGCG
CTCGGCGGCG AGTACGGCGG CGCGGCCACC TACGTGGCTG AACACGCCCC GCACGGCAAG
CGCGGCGCCT ACACCGCCTG GATCCAGACC ACCGCCACAC TGGGCCTGTT CCTGTCCCTG
ATCGTCATTC TGCTGTGCCG TGAACTCACG GGCCCGCAGT TCGACACGTG GGGCTGGCGC
ATCCCGTTCC TGGTCTCGAT CCTGCTGCTG GCCATGTCCG TGTATATCCG CCTGTCGATG
AGCGAGTCGC CGGCCTTCCA GAAGATGAAG GCCGAGGGCA AGACCTCGAA GGCACCGCTG
ACCGAGGCAT TCGGTCAATG GCGCAACCTG AAGATCGTGA TCCTGGCGCT GGTAGGCCTG
ACCGCCGGCC AGGCCGTGGT CTGGTACACC GGCCAGTTCT ACTCGCTGTT CTTCCTGACG
CAAGTGCTGA AGGTGGACGC CAAGACGGCC AACCTGCTGA TCGCCGGCGC ACTGGTGATT
GGTACGCCGT TCTTCATCTT CTTCGGCTCG CTGTCGGACA AGATCGGCCG CAAATGGATC
ATCATGCTGG GCTGCGCGCT GGCCGTGCTG ACCTACTTCC CGCTGTTCAA GGCGATGACC
CACTACGCCA ACCCGGCGCT GGAACGTGCG CAGCAGACCG CGCAGATCGT GGTCACGGCC
GATCCGAAGA CCTGCTCGTT CCAGGGCAGC CCGATCGCTC GCGAAATCGA CTTCCGCAGC
TCATGCGATA TCGTCAAGCG CACGTTGGCC CAGGCATCGG CCAGCTATGA AGTGGTGCAG
GCCCCGGCCG GCACGATGGC TTCGGTGAAG ATCGGCGACA AGGAAATCAA GGCCTTCGAC
GCCACGGTGA CCGGCGGCCA CAGCTTTGAC GACGCCAGCA AGAAGCAGAT CGCGGCGTTC
AAGAAGGAAG TGAGCGAGTC CATGAGCGCG GCCGGCTATC CGACCAAGGC AGACCCGGCG
CAGATGAACA CGATCATGGT GCTGGTGGTC CTGGTGATCC TGGTGATCTA CGTGACCATG
GTCTACGGCC CGATCGCCGC GATGCTGGTG GAAATGTTCC CGACCCGCAT CCGGTATTCG
TCGATGTCGC TGCCGTATCA CATCGGCAAC GGCTGGTTCG GTGGCCTGCT GCCAACGATC
TCCTTCGCCC TGGTGGCGCA GAACGGCAAC ATCTACTACG GCCTCTGGTA CCCGATCATC
ATCGCGGCCA TGACCTTCGT GCTGGGCGCG CTGTTCGTCC GCGAGACCAA GGACGTGGAT
ATCTACGCGA ACGACTGA
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| Protein sequence | MANAQNVAMP GGKAHNAPMT REEKKVILAS SLGTVFEWYD FYLYGSLAAV IAKQFFAGLD
PTSAFIFALL AFAAGFIVRP FGALVFGRLG DMIGRKYTFL VTILIMGLST FIVGLLPGYA
TIGWAAPIIL IALRMLQGLA LGGEYGGAAT YVAEHAPHGK RGAYTAWIQT TATLGLFLSL
IVILLCRELT GPQFDTWGWR IPFLVSILLL AMSVYIRLSM SESPAFQKMK AEGKTSKAPL
TEAFGQWRNL KIVILALVGL TAGQAVVWYT GQFYSLFFLT QVLKVDAKTA NLLIAGALVI
GTPFFIFFGS LSDKIGRKWI IMLGCALAVL TYFPLFKAMT HYANPALERA QQTAQIVVTA
DPKTCSFQGS PIAREIDFRS SCDIVKRTLA QASASYEVVQ APAGTMASVK IGDKEIKAFD
ATVTGGHSFD DASKKQIAAF KKEVSESMSA AGYPTKADPA QMNTIMVLVV LVILVIYVTM
VYGPIAAMLV EMFPTRIRYS SMSLPYHIGN GWFGGLLPTI SFALVAQNGN IYYGLWYPII
IAAMTFVLGA LFVRETKDVD IYAND
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