| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0456 |
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| Symbol | |
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| ID | 4037244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 484218 |
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| End bp | 485840 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637975830 |
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| Product | DEAD/DEAH box helicase-like protein |
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| Protein accession | YP_582611 |
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| Protein GI | 94309401 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTTT CCGAACTCGG CTTGTCCGAC AAGCTGGTGC GTGCCGTGGC CGAACAGGGC
TACACCACGC CGACCCCGAT TCAGGCGCAA GCCATTCCCG CAATTCTCAA AGGTGGCGAT
CTTCTTGCCG GTGCGCAAAC CGGCACCGGC AAGACGGCAG GTTTCACGCT GCCGATGCTG
CAATTGCTCT CCGAAACCGC CGCGCGCGCC AATGGCGGCA ATGCGCCCCG CGGCGCGCGC
CCGAACGTGC GTGCGCTGGT GCTGACGCCC ACGCGTGAAC TGGCCGCGCA GGTCGAAGAG
AGCGTGCGCA ACTATGGCAA GTATCTGAAG CTGCGTTCGA TGGTGATGTT CGGCGGCGTC
GGCATCAATC CGCAGATCGA GGCGCTCAGG CGCGGTGTCG ATATCGTGGT GGCCACGCCT
GGCCGTCTGC TGGACCACGT GGCGCAGCGC ACGATCGACC TCTCGCACGT TGAACTGCTG
GTGCTCGATG AAGCCGACCG CATGCTCGAC ATGGGCTTCA TCCACGATAT CCGCAAGGTC
CTGAACGTTC TGCCGCCCAA GCGCCAGAAT CTACTTTTCT CGGCCACGTT CTCGGACGAT
ATCCGCGCGC TGGCCGATCG CCTGCTGGAC AACCCGGCGT CGATCGAAGT GGCACGCCGC
AATACCACGG CGGAAACCGT GGCGCAGCGC GTGTTCCCGG TCGACCGGGA ACGCAAGCGC
GAACTGCTGG CCCATCTGGT GCGCCAGCAC GACTGGCATC AGGTGCTGGT GTTCACGCGC
ACCAAGCATG GCGCCAACCG GCTGGCCGAA CAATTGACCA AGGACGGCCT CTCAGCGCTG
GCGATCCACG GCAACAAGAG CCAGTCGGCC CGCACGCGCG CGCTGACCGA GTTCAAGGCC
GGCACGCTGC GCCTGCTGGT GGCCACCGAC ATCGCCGCAC GTGGCATCGA CATCGACCAG
CTCCCGCACG TGGTCAACTT CGATCTGCCC AACGTGCCCG AGGACTACGT GCACCGTATC
GGCCGTACTG GCCGTGCCGG CGCCGAAGGC GAGGCGATCT CGCTGGTTTG CGTGGACGAA
CATGGCCTGT TGCGCGATAT CGAGCGCCTG ATCAAGCGCC AGATCGAGCA GGTGCTGCTG
CCCGGTTTCG AAGTCGATCC GAGCATCAAG GCCGAGCCGA TCCAGAAGGG CCGGCAGCAG
CAGCGTGGCG GTCAGCCGCG CGGCAACGGC CAGGGGAATG CCGGCAACGG TGGCGAGCGC
CGCCAGCCGC GCGCCGCGCA AGGCGAGCGT CAGGAAGCGC CGCGCCAACC GCGTCCGGCA
CAGCCGGCGC GTGGCGAGGC CCGTAACGGC AACGCCGGAG GCAGTGGTAA TGCGCCGCGT
ACCGGGCAGG GAGGTGGGCG CGGCAACGGC CACGCCAATA GCACCGCCAA GGGCACGGCC
AAGGGCACGG CCAAGGGCAA TGCGCAGGGC AATGCGCAGG GCAATGCGAA CGCCAGGGGT
GCGAACCCGC GTCCGCAGCA AGCGCGTCCG GCTCAGGACA ACACTGCCGC GCCGCCCGCT
CGCAATCGTC GGCCGGCCCC GCAGGCGGCC CTGCTCGGCG GTGGCCGCAA GCCCGCCCAC
TGA
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| Protein sequence | MSFSELGLSD KLVRAVAEQG YTTPTPIQAQ AIPAILKGGD LLAGAQTGTG KTAGFTLPML
QLLSETAARA NGGNAPRGAR PNVRALVLTP TRELAAQVEE SVRNYGKYLK LRSMVMFGGV
GINPQIEALR RGVDIVVATP GRLLDHVAQR TIDLSHVELL VLDEADRMLD MGFIHDIRKV
LNVLPPKRQN LLFSATFSDD IRALADRLLD NPASIEVARR NTTAETVAQR VFPVDRERKR
ELLAHLVRQH DWHQVLVFTR TKHGANRLAE QLTKDGLSAL AIHGNKSQSA RTRALTEFKA
GTLRLLVATD IAARGIDIDQ LPHVVNFDLP NVPEDYVHRI GRTGRAGAEG EAISLVCVDE
HGLLRDIERL IKRQIEQVLL PGFEVDPSIK AEPIQKGRQQ QRGGQPRGNG QGNAGNGGER
RQPRAAQGER QEAPRQPRPA QPARGEARNG NAGGSGNAPR TGQGGGRGNG HANSTAKGTA
KGTAKGNAQG NAQGNANARG ANPRPQQARP AQDNTAAPPA RNRRPAPQAA LLGGGRKPAH
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