| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0436 |
|---|
| Symbol | |
|---|
| ID | 4037224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 460771 |
|---|
| End bp | 463245 |
|---|
| Gene Length | 2475 bp |
|---|
| Protein Length | 824 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637975810 |
|---|
| Product | organic solvent tolerance protein |
|---|
| Protein accession | YP_582591 |
|---|
| Protein GI | 94309381 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1452] Organic solvent tolerance protein OstA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.524466 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC AACGACGATC ACCGCATCAT CCGGCCACCC GACCGCCAGC GCCTCCGGGC
ACGTCCCGGC GCGTCCGCCT GCCCGCCAGC GCGCTGCGGC CGCTCGTGCT CGCCATGGCC
GGGCTGACGG TGAGTGCCCA TGCGCAGTAC GGCGCGACGT CCGCCATTCC GAACATCGAC
CTTGTCGAGC CGGTGGTCAC TCAGACCCCG GAGGCGCCGC CGCCGCCGGC TGAAGGCGGC
GATCTCGTGC CGCGCCTGAC CGAGCCCGCC ACGCGGACCG CCCCCAGTGG CAACACGCTA
AACCTCTCGC CGTCATCTAC GCCCTCGAAT CCGAACGCCC CGGCCTATGT GTCGGGCGAT
CGCGTAACGG GCTACAGCGA GAAGGGCGTG GAGATGGAAG GGCACGCCGA ACTGCGCCGC
GACGGTGGCG TGATCAAGGG CGACAGGCTC ACCTACGACC AGGACACCGA CGAAGCACAT
GCCACTGGCA ACGTGCGGCT TTCCAAGAGC GGCACGCTGG CCGTGGGCCC GGAAGCACGG
ATGCGCGTGC AGGCCAATGA AGGCTACATG CTGTCCCCGG ACTACTACTT CCAGCAGACT
GGCGGCTCCG GCAGCGCCGA GCGCGTCGAT TTCCTGGATC CGGACCGCAG CACGCTGAAG
AAGGCGACCT ACACGACCTG TTCGCCCGAT AACGCGGACT GGTACTTCAG CGCCAGAAAG
CTCGACCTGG ACAGCGATCG TCAGGTCGGC ACGGCCTATG GCGGTGTGCT TAATTTCTTT
GGCGTGCCGA TTGCCGGCGC GCCGGCGTTC AGTTTTCCGC TCAATGGCGA GCGTCGTAGC
GGCGTGCTGC CGCCGTTGTT CGGCTATGGG TCGAACTCGG GTGCCGACCT GACGGTGCCC
TACTACTTCA ACCTGGCGCC AAACCGCGAT CTGACGATCT ACCCGCGTAT CCTGACGTCG
CGCGGCGTGC AGCTTGGCGA GGATTTCCGG TATGTGGGCG ACGGCTACAG CGGACGTATC
CGCGGCGAGT TCCTGCCCGA CGACAAGAAG GCGGGCCGCA ACCGTTGGGC CTACTCGATC
CAGCACTACC AGAGCATCAT TCCTGGTATG ACGGCCTATG TGAACGTCAG CAAGGTTTCG
GATGACAAGT ATCCCGACGA CCTGACGCGT TCCGTATCGC AGTCGACTCT GCGTCAGTAC
ACGCAGGAAG GTGGCGTGAT CTATGCGTGG CAGGACTGGG TGTTCATGGC ACGGGTGCAG
AAGTTCCAGA CGCTGTTGCC CAGCGAGCCG TCCTACGAGC GCGAGCCGCA GTTGAACGCG
AAGTACAACC GCTATGATTT CCACGGTTTC GATATTTCGC TCGAAACTGA CTACACGCGG
TTCCGCATCC CGCTGACCAG TACCGGCTTC CAGCAGCCCG AGGGCAATCG CGCATTCATC
CAGCCGACGA TCAGTTACCC GATCATCCAC CCGGGCTGGT ACGTGACGCC GAAGTTCATC
TTCAACGCGG CGCAGTACAA CATGGATGCC GGCACCAACA CCACTGGCGC GTCGAATACG
CTCAATCGCG CCATTCCGAC CGTGAGCCTC GATTCGGGCA TGACGTTCGA GCGTGACGCG
CCGGGTGTGA GCAAGCTGTT TGGCGTGAAG TACACCCAGA CACTCGAGCC GCGCCTGTTC
TACGTCTACA CGCCGTTCTA CGACCAGAGT CAGTTCCCGC TGTTCGATAC AGTGCAGTCG
GACTTCGGCT ACGGCCAGAT CTTTACCGAG AACCCGTTTA CCGGTAACGA CCGCATCGCC
GACAATAACA AGCTGACGCT GGGCCTGACC ACGCGCCTGA TCGAATCGGA GACCGGTGTC
GAACGTTTCC GTGGCACGAT TGCGCAGCGC GTCGACTTCA CGGGCCAGCG TGTCCAGCTC
AACGGCACGC TGCCGGATGC CAAGCCGAGC TACTCGGACC TGCTGGCAGC CACCACGATC
CAGCTGTTCC GTGGCTACTA TCTCGATGCC GGCATCCAGT GGAATCCGGA CCAGGACAAG
GTCAACTACT CGAACGTGGC ACTCGCGTAC CGCCCGGAAT CGCGCAAGCT CATCAATTTT
GGCTATCGCT ACCGTCGCCC GACCTCGGTG ACAGACAATA CCGCGATCGA CCAGATCGAA
ATGTCGGGAC AGTGGCCGAT CACGCAACGC ACTTACGGTA TCGGCCGCGT GGCGTTCGAC
AAGTCGGCCA ACCAGCTCGT GGATGCGCTG GCCGGTTTCG AGTATGCCGC CGACTGCTGG
GTCGGCCGGT TCGTGTACCA GCGTTTCCGC AATACCTCGA ACGGTTACAC CGGGCGGGTT
TTCTTCCAGG TGGAGTTCCG TGGGCTGTCG AAGATCGGCT CCAACCCGCT GGACATGTTG
CGCCTGAACG TGCCGGGCTA CGAGCCCGTG ACGGCACGGC CGGTGCCGAC AACCCCGTAC
GATCACTATG AATGA
|
|---|
| Protein sequence | MTEQRRSPHH PATRPPAPPG TSRRVRLPAS ALRPLVLAMA GLTVSAHAQY GATSAIPNID
LVEPVVTQTP EAPPPPAEGG DLVPRLTEPA TRTAPSGNTL NLSPSSTPSN PNAPAYVSGD
RVTGYSEKGV EMEGHAELRR DGGVIKGDRL TYDQDTDEAH ATGNVRLSKS GTLAVGPEAR
MRVQANEGYM LSPDYYFQQT GGSGSAERVD FLDPDRSTLK KATYTTCSPD NADWYFSARK
LDLDSDRQVG TAYGGVLNFF GVPIAGAPAF SFPLNGERRS GVLPPLFGYG SNSGADLTVP
YYFNLAPNRD LTIYPRILTS RGVQLGEDFR YVGDGYSGRI RGEFLPDDKK AGRNRWAYSI
QHYQSIIPGM TAYVNVSKVS DDKYPDDLTR SVSQSTLRQY TQEGGVIYAW QDWVFMARVQ
KFQTLLPSEP SYEREPQLNA KYNRYDFHGF DISLETDYTR FRIPLTSTGF QQPEGNRAFI
QPTISYPIIH PGWYVTPKFI FNAAQYNMDA GTNTTGASNT LNRAIPTVSL DSGMTFERDA
PGVSKLFGVK YTQTLEPRLF YVYTPFYDQS QFPLFDTVQS DFGYGQIFTE NPFTGNDRIA
DNNKLTLGLT TRLIESETGV ERFRGTIAQR VDFTGQRVQL NGTLPDAKPS YSDLLAATTI
QLFRGYYLDA GIQWNPDQDK VNYSNVALAY RPESRKLINF GYRYRRPTSV TDNTAIDQIE
MSGQWPITQR TYGIGRVAFD KSANQLVDAL AGFEYAADCW VGRFVYQRFR NTSNGYTGRV
FFQVEFRGLS KIGSNPLDML RLNVPGYEPV TARPVPTTPY DHYE
|
|---|
| |