Gene Rmet_0420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0420 
Symbol 
ID4037208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp445409 
End bp446083 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content70% 
IMG OID637975794 
Productphosphoglycerate mutase 
Protein accessionYP_582575 
Protein GI94309365 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.104537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAAA GCACCGGCCC GCAATCGCTG GCCTACACCC ACCTGATCGT GATTCGCCAT 
GGCGAGACGG CCTGGAACCG CGAACGGCGG CTGCAGGGCC AGCTCGACAT CCCACTGAAT
GACACGGGCC GCGCCCAGGC GCGCGCGCTG GCCGAGGCGC TGGCCGGCGA GCCGATCGAC
GCGGTCTATT CGAGTGACCT GGGCCGTGCC ATGCAGACGG CGGCGCCGTT GGCCGAGACG
CTGGGTTTGC AAGTGCGGCC CGAGCGTCGA CTGCGGGAGC GTTGCTATGG CGATCTGGAG
GGGATGACCT ACGCTGAAGT GGCGGAGAAG CGCCCTGAGG ATTTCGCGCG CTGGCAGGCG
CGCGTGCCCG ACTACGCGCC GCCCGAGGGC GAATCGCTGC GCGAGTTTCA CGATCGGGCG
GTCGAGGTGG CGCTGTATCT GTCGCGGCGC CATCCTGGCG AGCGGATCGC GCTGGTGGCA
CACGGAGGCG TCCTCGACTG CCTCTACCGC GAGGCTGCCG GCATGACCCT CGAAGCGCCG
CGCGAGCACG AACTGCTCAA TGCCAGCGTC AACCGCCTGC GGTGCGACAC CGCCCACCTC
ACGCTGCTGC AGTGGGCCGA CGTCAGCCAC CTCGAGGCGC TGGCGCTGGA CGAAGTCGAT
CGACGCGTCC CCTGA
 
Protein sequence
MSQSTGPQSL AYTHLIVIRH GETAWNRERR LQGQLDIPLN DTGRAQARAL AEALAGEPID 
AVYSSDLGRA MQTAAPLAET LGLQVRPERR LRERCYGDLE GMTYAEVAEK RPEDFARWQA
RVPDYAPPEG ESLREFHDRA VEVALYLSRR HPGERIALVA HGGVLDCLYR EAAGMTLEAP
REHELLNASV NRLRCDTAHL TLLQWADVSH LEALALDEVD RRVP