| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0418 |
|---|
| Symbol | |
|---|
| ID | 4037206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 444196 |
|---|
| End bp | 444666 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637975792 |
|---|
| Product | D-tyrosyl-tRNA(Tyr) deacylase |
|---|
| Protein accession | YP_582573 |
|---|
| Protein GI | 94309363 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1490] D-Tyr-tRNAtyr deacylase |
|---|
| TIGRFAM ID | [TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.101595 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCCC TGATCCAGCG CGTTTCGCAG GCGCGCGTGA CCGTGGATGG CCGCACCACC
GGCGAGATCG GTGCGGGCCT GCTGGCGCTG GTCTGTGCCG AGCGCGGCGA CACCGAGGCG
CAGGCCGAGC GATTGCTGGC CAAGCTGCTG TCGTACCGTG TGTTTTCCGA CGCGGAAGGG
CGGATGAACC TGCCGGTGCA GAACATGGAC GGCCAGGGCA ACGCAGGCGG GCTGCTCGTG
GTGTCCCAGT TCACGCTGGC TGCCGATACC AACAGCGGCA CCCGGCCGAG CTTCACCCCG
GCTGCCGCGC CCGAGGACGG CCGCCGCCTT TACGATCATT TCGTGACCCG CGCCCGCGCC
GCGCATCCGT CGGTGCAGAC CGGCGAGTTC GGCGCGATGA TGCAGGTCAG CCTGACCAAC
GATGGTCCCG TGACGTTCTG GCTGCGCGTG CCACCGGCAG CGAATGCCTG A
|
|---|
| Protein sequence | MIALIQRVSQ ARVTVDGRTT GEIGAGLLAL VCAERGDTEA QAERLLAKLL SYRVFSDAEG
RMNLPVQNMD GQGNAGGLLV VSQFTLAADT NSGTRPSFTP AAAPEDGRRL YDHFVTRARA
AHPSVQTGEF GAMMQVSLTN DGPVTFWLRV PPAANA
|
|---|
| |