| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0404 |
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| Symbol | |
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| ID | 4037191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 431492 |
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| End bp | 432490 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637975778 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_582559 |
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| Protein GI | 94309349 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0677306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCCA CCGCACGACG TTTCGGCATC GATTTTCAGT GGGACCACTT CGACTTTTCC
AGTTACGCGT ACTACGAGCG CCACGGCAAG ATGCTGCCGG ACGACTGGTT TGACACCCTG
GTCAAGTACG ACGCCATCTA CTTTGGCGCG GTTGGCTGGC CGGCGAAGAT TGCCGATCAC
GTGTCGCTGT GGGGCTCCCT GCTGCAGTTC CGGCGCTCGT TCGACCAGTA TGTGAACCTG
CGCCCGGTCC GGCTGATGCC CGGCATCAAG AGCCCGCTGG CCGACCGCAA GCCGGGCGAC
ATCGATTTCT ACGTGGTGCG CGAGAACACC GAGGGTGAGT ATTCGAGTAT CGGTGGGCGC
ATGTTCCCGG GTACCGAGCG CGAGATCGTG ATGCAGGAGA CGGTGATGAG CCGGCACGGC
GTCGACCGCA TCCTGAAATT CGCGTTCGAA CTGGCGCAGA AACGCCCGAA GAAGCACCTG
ACGTCGGCCA CCAAGTCCAA CGGGATCTCG ATCACGATGC CGTACTGGGA CGAACGGGTG
GAGGCGATGG CCGCCAACTA TCCAGGCATG AAGGTCGACA AGTACCACAT CGACATCCTG
ACCGCCCACT TCGTACAGCA CCCGGACTGG TTCGACGTAG TGGTGGCCAG CAACCTGTTC
GGCGACATCC TGTCCGATCT CGGCCCGGCC TGTACCGGCA CGATCGGCGT GGCGCCATCG
GGCAACATCA ATCCTGATAA GGTCTATCCC AGCTTGTTCG AGCCCGTGCA TGGCTCGGCG
CCCGACATCG CTGGCCAGGG CATCGCCAAT CCGATCGGCC AGATCTGGTG CGGTGCAATG
ATGCTCGAAC ACCTGGGCCA CGCCGAGGCT GGCGCGGCCG TGCTGGCGGC CATCGAGCAG
GTGCTGGCCG CGGGACCGGG TCATGCGCCG CTGACGCGTG ATATTGGCGG TACCGCCTCC
ACGGCCGATC TCGGCCAGGC CATCGCGGAG GCGCTGTGA
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| Protein sequence | MDATARRFGI DFQWDHFDFS SYAYYERHGK MLPDDWFDTL VKYDAIYFGA VGWPAKIADH
VSLWGSLLQF RRSFDQYVNL RPVRLMPGIK SPLADRKPGD IDFYVVRENT EGEYSSIGGR
MFPGTEREIV MQETVMSRHG VDRILKFAFE LAQKRPKKHL TSATKSNGIS ITMPYWDERV
EAMAANYPGM KVDKYHIDIL TAHFVQHPDW FDVVVASNLF GDILSDLGPA CTGTIGVAPS
GNINPDKVYP SLFEPVHGSA PDIAGQGIAN PIGQIWCGAM MLEHLGHAEA GAAVLAAIEQ
VLAAGPGHAP LTRDIGGTAS TADLGQAIAE AL
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