| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0401 |
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| Symbol | |
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| ID | 4037188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 428922 |
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| End bp | 429605 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637975775 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_582556 |
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| Protein GI | 94309346 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.122403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCATACG AATTTGATTT CAGCTCGATC AACCCCTCCA CGCTGCATGT GCTGGGCGAA
GGGATGCTCG TGTCGGCCAA GATCACCGTG ACCGCGGTGA TCGTCGGCAT CGTCTGGGGC
ACGATTCTGG CGATGATGCG CCTGTCGTCG AACAAGCTGC TGAACTGGTT CGCGCAGGGG
TATGTGACCC TCTTCCGCTC CATCCCGCTG GTGATGGTGC TGTTGTGGTT CTTCCTGATC
ATTCCGCAGT TGCTGCAGAA GACGTTCAAC CTGTCGGCGG CATCGGACCT GCGCATGACT
TCGGCGCTGA TCGCGTTCTC GCTGTTCGAG GCCGCGTATT ACTCGGAGAT CATCCGCGCC
GGTATCCAGA GCGTGTCGCG CGGGCAGATG TTCGCCGCGC AGGCGATGGG CATGACCTAT
GGCCAGAGCA TGCGGCTGGT GATCCTGCCG CAGGCGTTCC GCAACATGGT GCCGCTGCTG
CTGACGCAGG GCATCATCCT GTTCCAGGAT ACGTCGCTGG TCTACGTGAG CGCGCTGGCG
GACTTCTTCG GCCAGGCGTA CGGCATTGGC GAACGTGATG GCCGCATCGT CGAGATGCTG
CTTTTCGCCG GCCTCATCTA CTTCATCATT TGTTTCTCCG CTTCGCTGCT GGTCAAGCGT
TACCAGAAAA AGGTGGCTGT ATGA
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| Protein sequence | MAYEFDFSSI NPSTLHVLGE GMLVSAKITV TAVIVGIVWG TILAMMRLSS NKLLNWFAQG
YVTLFRSIPL VMVLLWFFLI IPQLLQKTFN LSAASDLRMT SALIAFSLFE AAYYSEIIRA
GIQSVSRGQM FAAQAMGMTY GQSMRLVILP QAFRNMVPLL LTQGIILFQD TSLVYVSALA
DFFGQAYGIG ERDGRIVEML LFAGLIYFII CFSASLLVKR YQKKVAV
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