| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0398 |
|---|
| Symbol | |
|---|
| ID | 4037185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 425606 |
|---|
| End bp | 426913 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637975772 |
|---|
| Product | Glu/Leu/Phe/Val dehydrogenase |
|---|
| Protein accession | YP_582553 |
|---|
| Protein GI | 94309343 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0386663 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCCG CAGCACCGAC GCAAAACGTC TCCAATGGTC ATACCCTGCC TTCGTACCTG
AACGCCGACA ACCTCGGCCC GTGGGGGATC TACCTGCAGC AAGTCGACCG TGTCACGCCC
TACCTGGGCT CGCTGGCACG CTGGGTGGAA ACCCTGAAGC GCCCGAAGCG CGCGATGATC
GTCGACGTAC CCATCGAACT CGACAACGGC ACGATCGCCC ACTTCGAGGG CTATCGCGTG
CAGCACAACC TGTCGCGCGG CCCGGGCAAG GGCGGCGTCC GCTTCCACCA GGACGTGACG
TTGTCCGAGG TGATGGCGCT GTCGGCCTGG ATGTCGGTCA AGAATGCGGC CGTGAACGTG
CCGTACGGCG GCGCCAAGGG CGGTATCCGC GTTGATCCGC GCACCCTGTC GCACGGCGAA
CTGGAACGCC TGACCCGCCG GTACACGAGC GAAATCAACA TCATCATCGG ACCGAGCAAG
GACATTCCCG CCCCGGACGT GAACACCAAC GCCCAGGTCA TGGCCTGGAT GATGGATACC
TACTCGATGA ACTCGGGCAG CACGGCCACC GGCGTGGTGA CCGGCAAGCC GATCTCGCTG
GGCGGTTCGC TGGGTCGTCA TGAAGCCACG GGCCGCGGTG TGTTCGTCGT CGGTTCCGAG
GCGGCCCGCA ACCTGGGCAT GGACGTCAAG GGCGCGCGCG TGGCGGTGCA GGGCTTCGGC
AACGTGGGTG CCGTGGCAGC CAAGCTGTTC CATGAGGCGG GCGCCACGGT GGTGGCGGTG
CAGGACCATC GCACCACGCT GTTCGACCCG GCCGGTCTGG ACGTGCCGAA GATGATGGAG
TACGCGTCGC ACAGCGGCAC GATCGAAGGC TACCGCGCCG AGGTCATCTC CACCGAGCAG
TTCTGGGAAG TCGATTGCGA CATCCTGATC CCGGCCGCGC TGGAAGGGCA ACTGACCGCC
AGCAATGCGC CGAAGATCAA GGCGAAGCTG GTGATCGAGG GCGCCAACGG CCCGACCACG
CCCGAGGCCG ACGATATTCT TCGCGAGCGC AATATCCTGG TTTGCCCGGA CGTGATCGCC
AACGCCGGCG GCGTGACCGT GTCCTACTTT GAATGGGTGC AGGATTTCTC GAGCTTCTTC
TGGACCGAAG AGGAGATCAA CGAGCGCCTG GTACGGATCA TGCAAGAGGC CTTCCGGGCA
ATCTGGCAGG TTGCCCAGGA CAACAAGGTC ACGTTGCGGA CGGCTGCGTT TATCGTTGCC
TGTACGCGTA TTCTGCAGGC GCGCGAAATG CGCGGCCTGT ATCCCTGA
|
|---|
| Protein sequence | MSSAAPTQNV SNGHTLPSYL NADNLGPWGI YLQQVDRVTP YLGSLARWVE TLKRPKRAMI
VDVPIELDNG TIAHFEGYRV QHNLSRGPGK GGVRFHQDVT LSEVMALSAW MSVKNAAVNV
PYGGAKGGIR VDPRTLSHGE LERLTRRYTS EINIIIGPSK DIPAPDVNTN AQVMAWMMDT
YSMNSGSTAT GVVTGKPISL GGSLGRHEAT GRGVFVVGSE AARNLGMDVK GARVAVQGFG
NVGAVAAKLF HEAGATVVAV QDHRTTLFDP AGLDVPKMME YASHSGTIEG YRAEVISTEQ
FWEVDCDILI PAALEGQLTA SNAPKIKAKL VIEGANGPTT PEADDILRER NILVCPDVIA
NAGGVTVSYF EWVQDFSSFF WTEEEINERL VRIMQEAFRA IWQVAQDNKV TLRTAAFIVA
CTRILQAREM RGLYP
|
|---|
| |