| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0386 |
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| Symbol | |
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| ID | 4037173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 412352 |
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| End bp | 414778 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637975760 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_582541 |
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| Protein GI | 94309331 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00824486 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCAATT TCATCGTCAA GAAGGTCGCT GTGCTCGGTG CCGGCGTCAT GGGGGCGCAG
ATTGCCGCCC ATCTGATCAA CGCCCGCGTT CCCGTGATCC TGTTCGACCT GCCGGCCAAG
GAAGGCCCGA AGAACGGTAT CGCCGATCGC GCGATCGAGA ACCTGAAGAA GCTCTCGCCC
GCGCCGCTCG GCATCAAGGA AGAGGCCGGC CTGATTCGCG CCGCCAACTA CGAGGACGAC
ATCGCCCTGC TCAAGGAGTG CGACGTGGTG ATCGAGGCGA TCGCCGAGCG CATGGACTGG
AAGCATGACC TCTACAAGAA GGTGTCGCCG CATCTCGCGC CGAACGCAAT CTTCGCCACG
AACACGTCTG GCCTGTCGAT CACGGCGCTG TCCGATGGCT TCGATGCCGA CCTGAAGTCG
CGCTTCTGCG GTGTGCACTT CTTCAATCCG CCGCGCTACA TGCACCTGGT GGAGCTGATC
CCGACCGCGA CGACCAAGCC GGAGATTCTC GACCGTCTGG AATCGTTCCT GACCACGTCG
CTGGGCAAGG GTGTCGTGCG CGCCAAGGAC ACGTCGAACT TCATCGCCAA CCGTGTCGGC
ATCTTCTCGA TCCTGGCCGT GTTCGCCGAA GCCGAGAAGT TCGGCATTCC GTTCGATATC
GTCGACGACC TGACCGGTAC CAAGCTGGGC CGCGCCAAGT CGGCCACGTT CCGCACCGCC
GACGTGGTAG GCCTGGACAC GATGGCGCAC GTCATCAAGA CGATGCAGGA CAACCTGACC
GATGACCCGT TCGCGCCGGT GTACAAGACG CCGGCCGTGC TGAAGGGGCT GGTGGATGCC
GGCGCGCTGG GCCAGAAGAC CGGCGCCGGT TTCTACAAGA AGGAAGGCAA GGCGATCAAG
GTGCTGGACG CCAAGTCTGG CCAGTACGTC GAGTCCGGCA AGAAGGCCGA CGAGATCGTC
GTGCGCATCC TGAAGAAGGA ACCGGCCGAA CGTATCAAGC TGCTGCGTGA ATCGACCAAT
CCGCAGGCCC AGTTCCTGTG GGGCGTGTTC CGTGACGTGT TCCACTACAT CGCCGTCTAT
CTGGAACAGA TCGCTGGCTC GGCGGCCGAT ATCGACCTGG CCATTCGCTG GGGCTTCGGC
TGGAACTCGG GTCCGTTCGA AGATTGGCAG GCCGCTGGCT GGAAGCAGGT GGCCGAGTGG
GTCAAGGAAG ATGTCGAGGC AGGCAAGGCG CTCTCGAACG CTCCGCTGCC GGCATGGGTG
CTGAACGGCG CCGTGGCCGA GAACGGTGGC GTGCATGGCG CGCAGGGTTC GTGGTCGCCG
GCGGCCAGTG CATTCGTCAA GCGTGCCGAA TTGCCGGTGT ACCAGCGCCA GGTGTTCCGT
GCCGCGCTGA AGGGTACCGA CTCGCCCGAT CCGCGCCGTG CCGGCAAAAC GATCGAGGAG
AACGATGGCG CGCGCATCTG GACCACTGAT GGTGCCGACG ATGTGCTCGT GATCTCGTTC
AAGAGCAAGA TGAACACGGT TGGCCCAGAT GTGCTCGATA CCATCGTGCG CGCCGTGGAA
CTGGCCGAAG CCAGCTACAA GGGTCTGGTG GTGTGGCAAC CGACGTCGCT GCAACTGGGC
GCGCCGGGTG GTCCATTCTC GGCGGGCGCC AACCTGGAAG CCGCGATGCC GGCCTTCATG
ATGGGCGGTG CCAAGGGCAT CGAGCCGTTC GTCAAGAAGT TCCAGGACAC GATGATGCGC
GTGAAGTACG CGGCGGTGCC GGTGGTGCCG GCCGTGTCGG GCATCGCGCT CGGCGGTGGC
TGCGAACTGA TGCTGCATTC CGCGAAGCGG GTGGTGGCGC TGGAAAGCTA TGTCGGTCTC
GTCGAGGTGG GCGTGGGTCT GGTGCCGGCC GGCGGTGGCC TCAAGGAAGC CGCGATCGCA
GCAGCCAAGG CCGCGCAGGC AGCGGGCAGC ACGAACTACC TGAACTTCAT CACCAATCGC
TTCCAGGCAG CGGCGATGGC CAAGGTGTCG TCGTCGGCGC TCGACGCGCA GAAGATCGGC
TACGTCCAGC CGACCGACAC GATCGTCTAT AACGTCCATG AACTGCTGTA CGTGGCGCAG
AACGAAGTGC GCGCGCTGGC CAACGCCGGC TATCGCGCAC CGCTGCCCGG CCAGCTGATT
CCGGTGGCTG GCCGCTCGGG CATCGCCACG ATCAAGGCAT CGCTGGTCAA CATGCGCGAC
GGCAACTTCA TCTCGGCGCA CGACTTCCTG ATTGCCTCGC GCATCGCGGA AGTGGTTTGC
GGCGGCGATG TGGAGGCCGG CTCGCTGGTC AGCGAAGACT GGCTGCTGGC GCTGGAGCGT
CGCGCATTCA TCGACCTGCT GGGCAACGGC AAGACCCAGG AGCGGATCAT GGGAATGCTG
CAGACGGGCA AGCCGGTGCG CAACTAA
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| Protein sequence | MSNFIVKKVA VLGAGVMGAQ IAAHLINARV PVILFDLPAK EGPKNGIADR AIENLKKLSP
APLGIKEEAG LIRAANYEDD IALLKECDVV IEAIAERMDW KHDLYKKVSP HLAPNAIFAT
NTSGLSITAL SDGFDADLKS RFCGVHFFNP PRYMHLVELI PTATTKPEIL DRLESFLTTS
LGKGVVRAKD TSNFIANRVG IFSILAVFAE AEKFGIPFDI VDDLTGTKLG RAKSATFRTA
DVVGLDTMAH VIKTMQDNLT DDPFAPVYKT PAVLKGLVDA GALGQKTGAG FYKKEGKAIK
VLDAKSGQYV ESGKKADEIV VRILKKEPAE RIKLLRESTN PQAQFLWGVF RDVFHYIAVY
LEQIAGSAAD IDLAIRWGFG WNSGPFEDWQ AAGWKQVAEW VKEDVEAGKA LSNAPLPAWV
LNGAVAENGG VHGAQGSWSP AASAFVKRAE LPVYQRQVFR AALKGTDSPD PRRAGKTIEE
NDGARIWTTD GADDVLVISF KSKMNTVGPD VLDTIVRAVE LAEASYKGLV VWQPTSLQLG
APGGPFSAGA NLEAAMPAFM MGGAKGIEPF VKKFQDTMMR VKYAAVPVVP AVSGIALGGG
CELMLHSAKR VVALESYVGL VEVGVGLVPA GGGLKEAAIA AAKAAQAAGS TNYLNFITNR
FQAAAMAKVS SSALDAQKIG YVQPTDTIVY NVHELLYVAQ NEVRALANAG YRAPLPGQLI
PVAGRSGIAT IKASLVNMRD GNFISAHDFL IASRIAEVVC GGDVEAGSLV SEDWLLALER
RAFIDLLGNG KTQERIMGML QTGKPVRN
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