| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0356 |
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| Symbol | |
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| ID | 4037143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 376348 |
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| End bp | 378210 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637975730 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_582511 |
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| Protein GI | 94309301 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGCCC CCCCCACACC TGCCGCGCAT CATCCAGAAG CGCCCGCTTT CAATACCGAT
ACCAACTGCA CTGGCCGTCA CGCCGATCCG TCGCTATCGC TCGGGATGAT TGGCAACTGC
GCATTCTCGG CACTGGTCGA CGGACGCGGC CGCATCGTCT GGTGTTGCCT GCCGCGCTAC
GATGCCGACC CCGTTTTCAA TGCGCTGCTC GATTCGAGCG AGAACGGTGG CCACTTTTCC
ATCGAGGTGG AAGACCTGGC GAAGTCCACG CAGTGGTACG AGCCGAATAC GGCCATCCTG
CGCACGCGCC TGTACGACAA GCATGGTCAC TGCCTGGAAA TCACCGACTT CTGCCCTCGG
TTCTTCCGGC TCGGACGCTA TTTCCGCCCG CTGACGCTGG TGCGGCGGAT CCGGCCGGTC
CGTGGCGCGC CACGGGTGCG GGTCACGGTG GCACCGCGCT TCAACTGGGG CCGGATCAAG
CCGCAGATGA CACGCGGCAG CAGCCATGTG CGCTATATCG GCGAGGACCT GACGCTGCGG
ATGACCACAG ACGCGCCGCT GGCCTATGTG CTGTCGAACA CGCCGTTCCT GGTCACGCGC
AACTACAACT TCATTCTCGG GCCAGATGAA ACGCTGGCGC ATGGCGTGGA GGAGACCGCG
CGCGACTTCG AACAGGAGAC CACGTCCTAC TGGCGTATCT GGAGCCGCCG GCTGGCCGTG
CCGCGCGAAT GGCAGGACGC CGTGATCCGC GCGGCGATCA CGCTGAAGAT GTCGCTCTAC
GAGGAGACTG GCGCGATCGT CGCGGCGATG ACAACGAGCA TTCCCGAGGC GCCCGGCAGC
GGCCGGAACT GGGACTACCG CTACTGCTGG TTGCGCGACG CGTTCTTCGT GGTGCGCGCG
CTCAACAGCC TGTCCGAAGT CGGCACGATG GAGGACTACA TGCGCTGGCT GACGAATGTC
GTCGTGCAGG CGCAGGATGG CCATATCCAG CCGCTCTACG GCATCGGGCT CGAACGCGAG
CTGCCGGAGA GCGTCCTCGA TCATCTGGGC GGATATCGCA ATATGGGCCC GGTGCGCGTG
GGCAACCAGG CGCAGGAGCA TTTCCAGCAC GATGTCTACG GCAACGTGGT GCTCGGCGCC
GCGCAGGCGT TTCACGACCA CCGGCTGCTG CATCGTGGCG GCCTGACGGA ATTCCACCGG
CTCGAGGACG TCGGCGAGCA GGCGGTGCGC GTGTTCGGCA CGCCGGACGC GGGCATGTGG
GAGTTGCGCA CGCGCGCGCG GGTCCATACG TCTTCGGCGC TGATGAGCTG GGCAGCCTGC
GACCGGCTGG CCAAGATCGC CACCAAGCTC GAGCACCCGC AGCGCGCCGC GTACTGGGCG
GAACATGCCG ACCGCATGAA GCAACGCATC CTGGCCGAAT CGTGGAGCGA GTCGCGACAG
GCTTTCGCGG AGAGTTTCGG CGGTAACGTG CTCGACGCCA GCGTGCTGCT GATGGCGGAA
GTGAATTTCA TCGACCCGAA GGACCCGCGT TTCATTGCGA CGCTGAAGGC GCTCGAGGAA
ACGCTCTGCG ACGGACCGTA CATGCGGCGC TACGAGGCGC CGGACGACTT TGGCAAGCCC
GAGACAGCCT TCAATATCTG CACGTTCTGG CGCATCGACG CGCTGGCACG CATCGGCCGT
CGCGAGGAAG CGCGCGAAAT CTTCGAGGCC ATGCTGGCGG CGCGCAATCC GCTCGGGTTG
TTGTCGGAGG ACACGCACCC GGTCACGGGC GAGATGTGGG GCAACTTCCC CCAGACCTAT
TCGATGGTCG GCCTGATCAA TGGCGCCGTA CGGCTGTCGG CCCCCTGGGA CAGCGTGATT
TGA
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| Protein sequence | MNAPPTPAAH HPEAPAFNTD TNCTGRHADP SLSLGMIGNC AFSALVDGRG RIVWCCLPRY
DADPVFNALL DSSENGGHFS IEVEDLAKST QWYEPNTAIL RTRLYDKHGH CLEITDFCPR
FFRLGRYFRP LTLVRRIRPV RGAPRVRVTV APRFNWGRIK PQMTRGSSHV RYIGEDLTLR
MTTDAPLAYV LSNTPFLVTR NYNFILGPDE TLAHGVEETA RDFEQETTSY WRIWSRRLAV
PREWQDAVIR AAITLKMSLY EETGAIVAAM TTSIPEAPGS GRNWDYRYCW LRDAFFVVRA
LNSLSEVGTM EDYMRWLTNV VVQAQDGHIQ PLYGIGLERE LPESVLDHLG GYRNMGPVRV
GNQAQEHFQH DVYGNVVLGA AQAFHDHRLL HRGGLTEFHR LEDVGEQAVR VFGTPDAGMW
ELRTRARVHT SSALMSWAAC DRLAKIATKL EHPQRAAYWA EHADRMKQRI LAESWSESRQ
AFAESFGGNV LDASVLLMAE VNFIDPKDPR FIATLKALEE TLCDGPYMRR YEAPDDFGKP
ETAFNICTFW RIDALARIGR REEAREIFEA MLAARNPLGL LSEDTHPVTG EMWGNFPQTY
SMVGLINGAV RLSAPWDSVI
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