| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0354 |
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| Symbol | |
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| ID | 4037141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 373822 |
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| End bp | 375519 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637975728 |
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| Product | threonine dehydratase |
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| Protein accession | YP_582509 |
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| Protein GI | 94309299 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGCCG GACGCTGTCC TACAACTGTG GCTGTCACTG CACCCGTCGC ACGGCAACTG
CCAACCTGGC ACTGCCAAGT GCGCCATCCA TTATCATTGG CGGTTTCCGC CGATTTTTCC
GGTTTTTTTG CCGCTGCCCC CCGGCGCCGC ACTCCGCAGA CCATGACCCG CACGCCCGCC
AAGCCCGACT ATCTGAAAAA AATCCTGACC GCCAAGGTCT ATGACGTGGC CCAGGAGACC
GAATTGACCT ATGCGCCCGC GCTGTCGGCA CGCACCGGCA ATGCGGTCTG GTTCAAGCGC
GAGGACACCC AGCCGGTGTT CTCGTTCAAG TTGCGGGGGG CGTACAACAA GATGGCGTCC
CTCACGCCCG AGGAACTCAA GCGCGGCGTG ATCGCTGCTT CGGCAGGCAA CCACGCCCAG
GGCGTGGCGC TGGCGGCGGC CCGCATGCAG TGCAAGGCGA TCATCGCCAT GCCGACCACC
ACGCCGCAGG TGAAGATCGA CGCCGTGCGC GAGCGCGGCG GCGAGTGGGT GCAGATCGTT
CTGCACGGTG AGTCGTACAG CGATGCCTAC CTGCACGCGG CCGAACTCGA GAAGAAGCAC
AAGCTCGCGT TCATCCACCC GTTTGACGAC CCCGAGGTCA TCGCCGGCCA GGGCACCATC
GCGATGGAGA TCCTGCGCCA GCACCCTGGC CCGATCCACG CGATCTTTGT CGCCATCGGC
GGCGGCGGCC TGATCTCCGG CATCGCCGCC TACGTCAAGG CGGTGCGCCC CGAGATCAAG
GTGATCGGCG TGCAGACCTT CGATTCCGAT GCCATGAAGC GCTCGGTGGA CGCCGGCAAG
CGCGTGGAAC TGAAGGATGT GGGCCTGTTC TCGGACGGTA CCGCCGTCAA GCTGGTGGGC
AAGGAAACGT TCCGCATCAC GCGTGAACTG GTCGACGACA TCATCCTGGT CGATACCGAT
GCGATCTGCG CGGGCCTGAA GGATGTGTTC CAGGACACCC GCAGCATCCT CGAGCCGGCC
GGCGCGCTGG CCGTGGCCGG CCTCAAGGCG TACGCCGAGC GCGAGAAGCT CAAGCACCAG
CACCTGGTGG CGATCGCCTG CGGCGCCAAT ATGAACTTCG ACCGCCTGCG CTTTGTGGCC
GAGCGCGCCG AAGTGGGTGA AGCGCGCGAA GCGGTCTTCG CCGTGACGAT CCCCGAGGAA
CGCGGCAGCT TCAAGCGCTT CTGCGAACAG GTCGGCACGC GCAGCGTGAC CGAGTTCAAC
TACCGCATCG CCGACAAGGG CGTGGCGCAT ATCTTCGTCG GCGTGCAGAT CGCCAGCCGC
GCGGAGAGCG ACAAGATCGC CGCCAACTTC CGCCGCCATG GCTTTGACAC GCTCGACCTG
TCGAACGACG AACTGGCCAA GCAGCACATC CGCTACATGG TCGGCGGCCA TTCGCCGCTG
GCGCATGACG AACTGCTGTA TCGCTTCGAG TTCCCGGAGC GCCCGGGCGC GCTGATGAAG
TTCCTGTCCA GCATGAGCCC GAACTGGAAC ATCAGCCTGT TCCACTACCG GAACCAGGGC
GCGGATACGT CGAACATCCT GGTCGGCATC CAGGTGCCGA AGAACGAGAA GCGCGCGTTC
CGCAGCTTCC TTTCGACGCT CGGTTACGTA CACTGGGATG AGACCGACAA CCCCGTCTAC
AAGCTGTTCC TTTCCTGA
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| Protein sequence | MSAGRCPTTV AVTAPVARQL PTWHCQVRHP LSLAVSADFS GFFAAAPRRR TPQTMTRTPA
KPDYLKKILT AKVYDVAQET ELTYAPALSA RTGNAVWFKR EDTQPVFSFK LRGAYNKMAS
LTPEELKRGV IAASAGNHAQ GVALAAARMQ CKAIIAMPTT TPQVKIDAVR ERGGEWVQIV
LHGESYSDAY LHAAELEKKH KLAFIHPFDD PEVIAGQGTI AMEILRQHPG PIHAIFVAIG
GGGLISGIAA YVKAVRPEIK VIGVQTFDSD AMKRSVDAGK RVELKDVGLF SDGTAVKLVG
KETFRITREL VDDIILVDTD AICAGLKDVF QDTRSILEPA GALAVAGLKA YAEREKLKHQ
HLVAIACGAN MNFDRLRFVA ERAEVGEARE AVFAVTIPEE RGSFKRFCEQ VGTRSVTEFN
YRIADKGVAH IFVGVQIASR AESDKIAANF RRHGFDTLDL SNDELAKQHI RYMVGGHSPL
AHDELLYRFE FPERPGALMK FLSSMSPNWN ISLFHYRNQG ADTSNILVGI QVPKNEKRAF
RSFLSTLGYV HWDETDNPVY KLFLS
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