Gene Rmet_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0339 
Symbol 
ID4037126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp356913 
End bp358667 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content67% 
IMG OID637975713 
ProductFAD-dependent oxidoreductase 
Protein accessionYP_582494 
Protein GI94309284 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTA CCAAGGTCGA CATCGACTAC CAGCGCATCC AGTACGACTA CGTACCATGC 
GCCGAGCAGC GGGGGGCATT GACCAATGCC GCCCCGCATC CCGTGATCGT GGTCGGGGCC
GGGCCGATTG GCCTGGCCAC CGCCATCGAC CTGGCCCGCC ACGGCGTGCC GGTGGTGGTG
GTCGATGACG ACTGCATGCT CTCGGTCGGA TCGCGTGCAA TCTGCTTCGC CAAGCGCACG
CTGGATATCT TCGACCGGCT CGGCTGTGGC GACCGCATGG TCGACAAGGG CGTGCGCTGG
AACCTTGGCA AGGTCTTCCT GCGGGACAGC CAGGTCTATG CGTTCGACCT GTTGCCCGAA
TCCGACCACC AGCGGCCGGC GTTTATCAAC CTGCAGCAGT ACTACCTCGA GGGCTATCTG
CTCGAATGCG CGCAGGCGAT GCCCAACATC GAGATCCGCT GGAAGAGCAA GGCAGTTGCC
ATCGAGCAAC ACGCGGACCA CGTGACGCTG ACGATCGAAA CGCCCGATGG CTGTTACGCG
CTGCGCGGTG CCTACGTGGT GGCCGCCGAT GGCTCGCGCA GCCCGCTGCG CAAGATGCTG
GGTCTGGAGA GCCACGGTCA TACGTTCCGA GACCGCTTCC TGATCGCCGA CGTGAAGATG
GAAGCGCCGT TCCCGGCCGA GCGCTGGTTC TGGTTTGATC CGCCGTTCCA TCCGAACCAG
TCGGTGCTGC TGCACCGGCA GCCTGACAAC GTCTGGCGCA TTGACTTCCA GCTCGGGTGG
GATGCCGATC CCGCATTCGA GAAGACGCCC GAGCGTGTGC TGCCGCGTGT ACAGGCGCTG
CTTGGCCCCG ATGCGAAGTT CGAGCTCGAA TGGGTCAGCG TCTATACGTT CTCGTGCGTG
CGGATGGACA GCTTCCGCCA CGGCCGCGTG TTGTTCGCGG GCGATTCGGC CCACTGCGTC
TCGCCGTTCG GCGCGCGCGG CGCTAACAGC GGCGTGCAGG ATGCCGAGAA CCTTGCCTGG
AAACTGGCCT ACGTGCTGCA GGGCAAGGCG CCGGAAAGCC TGCTGGATAC CTACGCCAGC
GAGCGCGAGT TCGCGGCCGA CGAGAACATC CTCAACTCGA CGCGCTCGAC CGATTTCATT
ACGCCGAAGA GCGCGGTCAG CCGCATCTTC CGCGACGCGG TGCTGACACT GGCGCGCGAC
CACGCGTTTG CGCGGCAACT GGTCAATAGT GGCCGGCTGT CGGTGCCGGC CGTGCTGCGC
GACTCGCCGC TGAACACCGC CGATGCGGAA TCGTTCTCCG GCCAGATGGT GCCGGGCGCA
GCATGCGTCG ATGCCCCCGT GGCCGGCACG GAAGGCAAGC CCTGGTTGCT GCCGCATCTG
GGCGACGACT TCGTGGCGCT GATCTTTGGC GCGCCGGCTG GCATCGACGC AGCATGCCGT
GAAGCGCTGA CGCAACTGCT GCAGGGAGAC ATTCCGCTGC GGGTGGTGTT CGTGACCGAT
GCGGCCATTT CGGCATCGGC CGAAGCCTGG CCCGGCGCGG TCGTGCTGCG CGACGCGGGC
GGCGTGGCGG CCCGGCGCTA TGACGCGCGC GCGGGCACCT GCTACCTGAT TCGCCCTGAC
CAGCACGTCT GCGCGCGGTG GCGCGCGGTC GATGCGAACC AGATCGCCGG AGCGATCGCT
CGCGCCACAT GCAATGCCGC AGCAACCGTC GCGGCGCAAT CGCCAGCCGC GGCACGCACG
CCGGCACTGG CCTGA
 
Protein sequence
MSSTKVDIDY QRIQYDYVPC AEQRGALTNA APHPVIVVGA GPIGLATAID LARHGVPVVV 
VDDDCMLSVG SRAICFAKRT LDIFDRLGCG DRMVDKGVRW NLGKVFLRDS QVYAFDLLPE
SDHQRPAFIN LQQYYLEGYL LECAQAMPNI EIRWKSKAVA IEQHADHVTL TIETPDGCYA
LRGAYVVAAD GSRSPLRKML GLESHGHTFR DRFLIADVKM EAPFPAERWF WFDPPFHPNQ
SVLLHRQPDN VWRIDFQLGW DADPAFEKTP ERVLPRVQAL LGPDAKFELE WVSVYTFSCV
RMDSFRHGRV LFAGDSAHCV SPFGARGANS GVQDAENLAW KLAYVLQGKA PESLLDTYAS
EREFAADENI LNSTRSTDFI TPKSAVSRIF RDAVLTLARD HAFARQLVNS GRLSVPAVLR
DSPLNTADAE SFSGQMVPGA ACVDAPVAGT EGKPWLLPHL GDDFVALIFG APAGIDAACR
EALTQLLQGD IPLRVVFVTD AAISASAEAW PGAVVLRDAG GVAARRYDAR AGTCYLIRPD
QHVCARWRAV DANQIAGAIA RATCNAAATV AAQSPAAART PALA