Gene Rmet_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0338 
Symbol 
ID4037125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp355850 
End bp356809 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content64% 
IMG OID637975712 
Productbeta-lactamase-like protein 
Protein accessionYP_582493 
Protein GI94309283 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.549324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG CATTCGCATC CCAGGCCGAC CTGGAAGCCA AGCAGATCAC CTTCACCCAG 
CTTTCCGAAA ATGCCTACGC CTACACAGCC GAGGGCGACC CCAACTCCGG CGTGATCATC
GGCGATGACG GCGTGATGAT CATCGACACC ACCGCCACGC CCGCCATGGC GCAGGACCTG
ATCGCCAAGA TCCGCGCGAT CACGGACAAG CCGATCAAGT ACGTGGTGCT GTCGCACTAC
CACGCGGTGC GTGTGCTCGG CGCGTCGGCG TACTTCGCCG AAGGCGCGCA GCAGATCATC
GCCAGCCGTG GCACCTACGA AATGATCGTC GAGCGCGGCG AAGCCGACAT GAAGTCCGAG
ATCGAACGTT TTCCGCGTCT GTTCGCCGGC GTGGAAACCG TGCCGGGTCT GACTTGGCCA
ACGCTCGTGT TCGAACGCGA AATCACGCTG TTTCTGGGCA AGCTCGAAGT GCGCATCGCC
CATCTGGGCG CGGGCCATAC GAAGGGCGAC ACCGTGGTGT GGCTGCCGCA GCAGAAGGTG
CTGTTCTCGG GCGATCTGGT CGAATACGAC GCGGCCTGCT ACTGCGGCGA TGCCCAGCTC
GAGCAATGGC CTGCCACGCT CGACGCGCTG GCCGCGCTGC AGCCCGAGAA GCTGGTGCCG
GGCCGTGGCC CAGCGCTGAC CACGCGCGAG GACGTGGCCA AGGGCCTGGC CTACACCAAG
GATTTCGTGT CCACGCTGTT CCAGGCTGGC AAGGAAGCCG TGGCCGGAAA GATGGATCTG
AAGGCGGCGA TGGCGCATAC GCGCAAGTCG ATGGACCCGA AGTTCGGCCA GGTGTTCATC
TACGAACACT GCCTGCCGTT CGACGTGTCG CGCGCCTTCG ACGAGGCAGC CGGCGTCACG
CATCCCCGTA TCTGGACCGC GCAGCGTGAC CAGGAGATGT GGGCGGCGCT GCAGGACTGA
 
Protein sequence
MAKAFASQAD LEAKQITFTQ LSENAYAYTA EGDPNSGVII GDDGVMIIDT TATPAMAQDL 
IAKIRAITDK PIKYVVLSHY HAVRVLGASA YFAEGAQQII ASRGTYEMIV ERGEADMKSE
IERFPRLFAG VETVPGLTWP TLVFEREITL FLGKLEVRIA HLGAGHTKGD TVVWLPQQKV
LFSGDLVEYD AACYCGDAQL EQWPATLDAL AALQPEKLVP GRGPALTTRE DVAKGLAYTK
DFVSTLFQAG KEAVAGKMDL KAAMAHTRKS MDPKFGQVFI YEHCLPFDVS RAFDEAAGVT
HPRIWTAQRD QEMWAALQD