Gene Rmet_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0336 
Symbol 
ID4037123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp354044 
End bp354850 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content71% 
IMG OID637975710 
ProductIclR family transcriptional regulator 
Protein accessionYP_582491 
Protein GI94309281 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.780836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG ACATGCTGGC GGACGCCGCC AAACCCCAAC GCGGCATCCA GTCGCTCGAC 
AACACAGGCC AGTTGCTCGG CGCGCTGGTC GATGCGGGGC AGCCACTCTC GCTTGGGGAA
CTCGCACGCG CGGCGGGCAT GGTGCCTGCC AAGGCATTTC CGCATCTGGT CAGCCTGCAG
AAGATCGGAC TGATTTCCCG CAACGCCGAT GGCGACTTCC AGGCTGGCAC GCTTGGTCTG
GAACTCGGCC TGATCGCGCT GCAGCGGCTC TCCCCGACGC GCGAGGCGGA GCCGGAGGTC
ATCGCCCTGG CCCATGCCAC GGGGTTGTCG GTGGCGATGG CCGTCCAGGG GCCGCTCGGT
CCCACCGTGA TCCGGCTCGA GGAATCGGCC CGTCCGCAGC ACGTGAGCCT GCGCGTGGGT
ACCGTGCTGT CGATGGTCAA TACGGCGATT GGCCGCGTGG TGGCGGCGCA TCTCCCCGAC
GACCTGCTGG CCGACGCGCT CGCGCAGGAT GCTATCCGCA TGGCGGGCAC CGCCTTCGAC
GGCGCGTTGC CATCCGGATA CCTCGAACGG CTGCGCGGCA TCCGCGCCGG CGGCATCGAC
CACGCCGTGA GCCGGCCCGT ACCCGGCATC GACACGCTGG CCGCACCGGT GTTCGACCAC
ACCGGCGCGC TCGCCCTGGT GGTCGCGGTG ATGGGCAGTA GCGGCAGCTT CGACAGCCGG
CTCGACAGCG ATACCGCCCA CGTGGTGCGG CAGGCCGCGC GGCGGCTGTC ATGGCGATTC
GGCGCGAGCG GCGCGACGCC CGCCTGA
 
Protein sequence
MSDDMLADAA KPQRGIQSLD NTGQLLGALV DAGQPLSLGE LARAAGMVPA KAFPHLVSLQ 
KIGLISRNAD GDFQAGTLGL ELGLIALQRL SPTREAEPEV IALAHATGLS VAMAVQGPLG
PTVIRLEESA RPQHVSLRVG TVLSMVNTAI GRVVAAHLPD DLLADALAQD AIRMAGTAFD
GALPSGYLER LRGIRAGGID HAVSRPVPGI DTLAAPVFDH TGALALVVAV MGSSGSFDSR
LDSDTAHVVR QAARRLSWRF GASGATPA