Gene Rmet_0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0331 
Symbol 
ID4037118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp349720 
End bp350232 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content60% 
IMG OID637975705 
Productprotein tyrosine phosphatase 
Protein accessionYP_582486 
Protein GI94309276 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.481618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA AGACCTTCAA CGTGCTGGTG CTGTGCACCG GCAACTCAGC CCGCAGCGTG 
ATGGCCGAAG CGCTGTTCAA TGTCCTCGGC AAGGGACGCT TTCACGCCTA CAGCGCCGGC
AGCCATCCAT CTGGCACGGT CAATCCCTTC GCCATCGAAC GATGCCAGGC AATTGGCTAC
GACACGACTG GCCTGCGTAG CAAGAGCTGG GACGAGTTCG CACTGCCCGA TGCGCCCAGG
ATGGACTTCG TTATTACCGT CTGCGACCAA GCCGCAGGCG AGGTGTGCCC GATCTGGCCA
GGTACACCCA TCACGGCACA TTGGGGCTTC CTCGACCCGG CAGCCATACA GGGCTCCGAT
GACGAGAAGC GCAAGATATT TGCCCAGGTT TTCCGGCAGA TTCTGAATCG AGTCAGCCAG
TTCGTGAACC TGCCGTTGCA CGTGCTGGAC CGGAACGCCA TTCAGAAGGA GATGCACGCC
ATTGGCGAGC AACCCGTGGA GTCCGCGCAA TGA
 
Protein sequence
MTDKTFNVLV LCTGNSARSV MAEALFNVLG KGRFHAYSAG SHPSGTVNPF AIERCQAIGY 
DTTGLRSKSW DEFALPDAPR MDFVITVCDQ AAGEVCPIWP GTPITAHWGF LDPAAIQGSD
DEKRKIFAQV FRQILNRVSQ FVNLPLHVLD RNAIQKEMHA IGEQPVESAQ