Gene Rmet_0302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0302 
Symbol 
ID4037089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp318214 
End bp318567 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content53% 
IMG OID637975676 
Product30S ribosomal protein S30P / sigma 54 modulation protein 
Protein accessionYP_582457 
Protein GI94309247 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.227103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCA AGATCAGTGG ACACCACCTC GACATCACGC CGCCGCTGCG TGAGTATGTG 
GAAACGAAAC TGGAGCGAAT TGTCAGACAT TTCGATCAGG TCATTGGCGT AAGCGTGCTG
CTATCCGTAG ACAACCATAA GGAAAAGGAC AAGCGTCAGT ACGCGGAAAT CAACCTGCAC
CTCAAGGGCA AGGACATCTT CGTCGAAGCG CATCATGAAG ACCTTTATGC TGCAATCGAC
TGCCTGGTCG ACAAGCTCGA CCGCCAGGTG ATCCGCTACA AGGACCGCGT GCAAGGGCAT
GACCGGGAAG CGGTCAAGTA CCAGATGGCC GCCGAACAAC TACAACAACA ATAA
 
Protein sequence
MNFKISGHHL DITPPLREYV ETKLERIVRH FDQVIGVSVL LSVDNHKEKD KRQYAEINLH 
LKGKDIFVEA HHEDLYAAID CLVDKLDRQV IRYKDRVQGH DREAVKYQMA AEQLQQQ