Gene Rmet_0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0292 
Symbol 
ID4037079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp307339 
End bp309246 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content66% 
IMG OID637975666 
Producthypothetical protein 
Protein accessionYP_582447 
Protein GI94309237 
COG category[S] Function unknown 
COG ID[COG4700] Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGACC ATCTTTCGTC CTTTCAGGCC ATGCGCCCGG AATCTTCGCA AATGAAAGCT 
TTCACTGTCA CCGGTCCGAC GATTTCCCCC GCCGGACGTT TCCGTCGCCA TGCGCGCGCC
TTGGGCGTGG CCGCGTGCCT GGCGCTGGTT TCGCTCGCTT CCCATGCCGC ATCGGCCAAG
GTTGCCCAGA ACGATGACGA GGTCATCGAC GTTCCGGCGC CATCGTCGGC AGCACGCGCG
CAGCGGACGC CGCTACCCAA TGTTTCGCTG TCGCCGGACA TCCTCTACCG GGTGCTGGCG
GCGGAAATCT CGCTGCAACG TGGGATGGCC GGCGCGTCAT ACCGGACCTA TCTTGATCTT
GCTCGCGAAA CGCGTGACCC GAGACTGGCC CAGCGCGCCA CCGAAATCGC ATTCAACGCG
CGCAGTTCGC AGCAGGCGCT GGATGGCGCC CGGCTATGGT CCGAGCTGGC GCCGAAATCG
CCGGCGGCAA GCCAGGTCCT GGCAACTCTG CTCGTGCTCA ACGGACGCTG GGAGGAAGCC
GAGCCCCTGC TGAGCCGCCA ACTGGCGACG GCGCCGGCCG CGCATCGCGG GGACGCCATC
CTGCAATTGC AGCAGCAGAT GTCGCGCACG AGTGACCCCG CAGGCGCAGT CGCCGTGCTC
CAGCGCCTGA CCGCCAACGA TTCGAAGCTG CCGGAAACCC ACCTGGCCCT GGCGCGTGCG
CAAGAGATCG CCGGAAACAG CCAAGGTGCA CTGACCGAGC TTGATGAGGC ACTTCGACTC
AAGCCCAATC TCGAGGCTGC CGCGCTCATG TCGGCCGAAA TGCAAGCCGA ATCGGCCCCC
GACAAGTCGA TCGCGGTGAT GAAGCGCTTC CTGGCCAAGT CGCCCTCGTC GGTCAACGGC
CACATCACGC TGGCAAGGCT GTATCTGCAA CAGAACGACA TGGATTCGGC CCGTGCCGAG
TTCGAGGTCC TGCGCAAGGT TGCGCCGACC GATCCGCGCG TGCCGCTGGC TCTGGGACTG
ACCAGCCTGC AGGCGCGCAG TTATGACGAT GCCGAACGCT ATCTGAAGGA GTACCTGCAG
ATGGCGGAGA AGTCGCCGGC GGCCAACCCC GACATCGCGT ACCAGTACCT GGCGCAGATC
GCCGAGGAAA AGAAGGACTA TCCCGCGGCA ATCGACTGGC TCGACCGTAT CGAGGACCCG
CGCCTGACCC TGGCCGCGCA GGCCAAGCGT GGCCAATTGC TGGCACGCAT GGGCAAGCTC
GACGATGCGC AGGCCGTGTT TGGCGACATG CTGGCCGACG CCGAAGACAT CCCCGATCCC
GCGCAGCGCG CCCTGCGCAT GTCCGCGATC CGCCAGGCCG AGGTGGCCGC GCTGATGGAC
AGCAAGGCAT ACGACCGCGC GCGCAAGGTG CTGGACGAGC GCGTCAAGGC CGAACCCGAC
AATGCGGACT GGATCTACGA ACTGGCGATG CTCGACGAAC GCGAGAAGCG CTACGACAGC
ATGGAGCGTG GGCTGCTCAA AGTGATCGCG CTGCAGCCCG ACCAGAAGCA GGGCTACAAC
GCGCTCGGCT ACTCGCTGGC CGACCGTAAC GAGCGTCTGC CGGAAGCGCG CAAGCTGCTC
GAACGCGCAT CCGAGCTCGG ACCGGATGAC CCCTACATCA TGGACAGCCT GGCGTGGGTC
AAGTACCGTC AGGGCGAACT GCAGCCCGCG GCTGATCTGC TCAAGAACGC GTTTGCCAAG
GCCCCCGAGG CCGAAATCGG CGCGCATCTG GGCGAGGTGC TCTGGCAGCT CGGCCAGCGC
GACGAGGCAC GCAAGACGTG GAACGAGGCG GCGAAGGTCG AGCCGGACAA TCAGACGCTG
ATCGACACGC TGCGCCGTTA CAACCAGAAC GTCCTGCTGT CGAAGTAG
 
Protein sequence
MQDHLSSFQA MRPESSQMKA FTVTGPTISP AGRFRRHARA LGVAACLALV SLASHAASAK 
VAQNDDEVID VPAPSSAARA QRTPLPNVSL SPDILYRVLA AEISLQRGMA GASYRTYLDL
ARETRDPRLA QRATEIAFNA RSSQQALDGA RLWSELAPKS PAASQVLATL LVLNGRWEEA
EPLLSRQLAT APAAHRGDAI LQLQQQMSRT SDPAGAVAVL QRLTANDSKL PETHLALARA
QEIAGNSQGA LTELDEALRL KPNLEAAALM SAEMQAESAP DKSIAVMKRF LAKSPSSVNG
HITLARLYLQ QNDMDSARAE FEVLRKVAPT DPRVPLALGL TSLQARSYDD AERYLKEYLQ
MAEKSPAANP DIAYQYLAQI AEEKKDYPAA IDWLDRIEDP RLTLAAQAKR GQLLARMGKL
DDAQAVFGDM LADAEDIPDP AQRALRMSAI RQAEVAALMD SKAYDRARKV LDERVKAEPD
NADWIYELAM LDEREKRYDS MERGLLKVIA LQPDQKQGYN ALGYSLADRN ERLPEARKLL
ERASELGPDD PYIMDSLAWV KYRQGELQPA ADLLKNAFAK APEAEIGAHL GEVLWQLGQR
DEARKTWNEA AKVEPDNQTL IDTLRRYNQN VLLSK