Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0292 |
Symbol | |
ID | 4037079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 307339 |
End bp | 309246 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637975666 |
Product | hypothetical protein |
Protein accession | YP_582447 |
Protein GI | 94309237 |
COG category | [S] Function unknown |
COG ID | [COG4700] Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGACC ATCTTTCGTC CTTTCAGGCC ATGCGCCCGG AATCTTCGCA AATGAAAGCT TTCACTGTCA CCGGTCCGAC GATTTCCCCC GCCGGACGTT TCCGTCGCCA TGCGCGCGCC TTGGGCGTGG CCGCGTGCCT GGCGCTGGTT TCGCTCGCTT CCCATGCCGC ATCGGCCAAG GTTGCCCAGA ACGATGACGA GGTCATCGAC GTTCCGGCGC CATCGTCGGC AGCACGCGCG CAGCGGACGC CGCTACCCAA TGTTTCGCTG TCGCCGGACA TCCTCTACCG GGTGCTGGCG GCGGAAATCT CGCTGCAACG TGGGATGGCC GGCGCGTCAT ACCGGACCTA TCTTGATCTT GCTCGCGAAA CGCGTGACCC GAGACTGGCC CAGCGCGCCA CCGAAATCGC ATTCAACGCG CGCAGTTCGC AGCAGGCGCT GGATGGCGCC CGGCTATGGT CCGAGCTGGC GCCGAAATCG CCGGCGGCAA GCCAGGTCCT GGCAACTCTG CTCGTGCTCA ACGGACGCTG GGAGGAAGCC GAGCCCCTGC TGAGCCGCCA ACTGGCGACG GCGCCGGCCG CGCATCGCGG GGACGCCATC CTGCAATTGC AGCAGCAGAT GTCGCGCACG AGTGACCCCG CAGGCGCAGT CGCCGTGCTC CAGCGCCTGA CCGCCAACGA TTCGAAGCTG CCGGAAACCC ACCTGGCCCT GGCGCGTGCG CAAGAGATCG CCGGAAACAG CCAAGGTGCA CTGACCGAGC TTGATGAGGC ACTTCGACTC AAGCCCAATC TCGAGGCTGC CGCGCTCATG TCGGCCGAAA TGCAAGCCGA ATCGGCCCCC GACAAGTCGA TCGCGGTGAT GAAGCGCTTC CTGGCCAAGT CGCCCTCGTC GGTCAACGGC CACATCACGC TGGCAAGGCT GTATCTGCAA CAGAACGACA TGGATTCGGC CCGTGCCGAG TTCGAGGTCC TGCGCAAGGT TGCGCCGACC GATCCGCGCG TGCCGCTGGC TCTGGGACTG ACCAGCCTGC AGGCGCGCAG TTATGACGAT GCCGAACGCT ATCTGAAGGA GTACCTGCAG ATGGCGGAGA AGTCGCCGGC GGCCAACCCC GACATCGCGT ACCAGTACCT GGCGCAGATC GCCGAGGAAA AGAAGGACTA TCCCGCGGCA ATCGACTGGC TCGACCGTAT CGAGGACCCG CGCCTGACCC TGGCCGCGCA GGCCAAGCGT GGCCAATTGC TGGCACGCAT GGGCAAGCTC GACGATGCGC AGGCCGTGTT TGGCGACATG CTGGCCGACG CCGAAGACAT CCCCGATCCC GCGCAGCGCG CCCTGCGCAT GTCCGCGATC CGCCAGGCCG AGGTGGCCGC GCTGATGGAC AGCAAGGCAT ACGACCGCGC GCGCAAGGTG CTGGACGAGC GCGTCAAGGC CGAACCCGAC AATGCGGACT GGATCTACGA ACTGGCGATG CTCGACGAAC GCGAGAAGCG CTACGACAGC ATGGAGCGTG GGCTGCTCAA AGTGATCGCG CTGCAGCCCG ACCAGAAGCA GGGCTACAAC GCGCTCGGCT ACTCGCTGGC CGACCGTAAC GAGCGTCTGC CGGAAGCGCG CAAGCTGCTC GAACGCGCAT CCGAGCTCGG ACCGGATGAC CCCTACATCA TGGACAGCCT GGCGTGGGTC AAGTACCGTC AGGGCGAACT GCAGCCCGCG GCTGATCTGC TCAAGAACGC GTTTGCCAAG GCCCCCGAGG CCGAAATCGG CGCGCATCTG GGCGAGGTGC TCTGGCAGCT CGGCCAGCGC GACGAGGCAC GCAAGACGTG GAACGAGGCG GCGAAGGTCG AGCCGGACAA TCAGACGCTG ATCGACACGC TGCGCCGTTA CAACCAGAAC GTCCTGCTGT CGAAGTAG
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Protein sequence | MQDHLSSFQA MRPESSQMKA FTVTGPTISP AGRFRRHARA LGVAACLALV SLASHAASAK VAQNDDEVID VPAPSSAARA QRTPLPNVSL SPDILYRVLA AEISLQRGMA GASYRTYLDL ARETRDPRLA QRATEIAFNA RSSQQALDGA RLWSELAPKS PAASQVLATL LVLNGRWEEA EPLLSRQLAT APAAHRGDAI LQLQQQMSRT SDPAGAVAVL QRLTANDSKL PETHLALARA QEIAGNSQGA LTELDEALRL KPNLEAAALM SAEMQAESAP DKSIAVMKRF LAKSPSSVNG HITLARLYLQ QNDMDSARAE FEVLRKVAPT DPRVPLALGL TSLQARSYDD AERYLKEYLQ MAEKSPAANP DIAYQYLAQI AEEKKDYPAA IDWLDRIEDP RLTLAAQAKR GQLLARMGKL DDAQAVFGDM LADAEDIPDP AQRALRMSAI RQAEVAALMD SKAYDRARKV LDERVKAEPD NADWIYELAM LDEREKRYDS MERGLLKVIA LQPDQKQGYN ALGYSLADRN ERLPEARKLL ERASELGPDD PYIMDSLAWV KYRQGELQPA ADLLKNAFAK APEAEIGAHL GEVLWQLGQR DEARKTWNEA AKVEPDNQTL IDTLRRYNQN VLLSK
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