Gene Rmet_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0280 
Symbol 
ID4037066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp296200 
End bp296847 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content61% 
IMG OID637975653 
Productmaleylacetoacetate isomerase 
Protein accessionYP_582435 
Protein GI94309225 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.676121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAC TCCATAGCTA CTTCCGCAGC TCGGCGTCGT TCAGGGTGCG TATCGCGCTG 
AACCTGAAGG GCTTGCCCTA TGACTACAAG GGTGTGCATC TGCTGAAGGA AGGCGGCATG
CAGCTGAAGC CCGAATATCG CGCGCTGAAT GCCGATGGCG TGGTGCCGAC GCTCGTGGTC
GATGGCAGGC CGCTGATTCA GTCGATGGCG ATCATCGAGT ATCTCGACGA AACCCATCCG
GAGCCTGCGC TGCTGCCGAA GGATCCGTTC GAGCGTGCCG TCGTGCGCGG CCTGGCTCAG
GAAATCGCCT GCGAGATCCA TCCGCTCAAC AACCTGCGCG TGCTCAAGTA CCTCAAGCAC
GAGCTCAAGG TGTCGGAGGA AGCCAAGGAT GCGTGGTACC GCCACTGGAT CGAACAGGGG
TTTGCCTCGC TCGAAGTCAA TCTGTCGCAA CTGGGGCGTG TGGGTCGCTT TGCGTTCGGC
GATACGCCGA CATTGATCGA CTGCTGCCTG GTGCCGCAGG TATTCAATGC GCAGCGCTTC
AATGTTGATG TGAGCCGCTT CCCGACGATC GCGAAGATCC ATGCCACTTG CATGGAGCTG
GACGCGTTCC AGAAGGCCGC GCCCGGGGCG CAGCCGGACA GCGAGTAA
 
Protein sequence
MLELHSYFRS SASFRVRIAL NLKGLPYDYK GVHLLKEGGM QLKPEYRALN ADGVVPTLVV 
DGRPLIQSMA IIEYLDETHP EPALLPKDPF ERAVVRGLAQ EIACEIHPLN NLRVLKYLKH
ELKVSEEAKD AWYRHWIEQG FASLEVNLSQ LGRVGRFAFG DTPTLIDCCL VPQVFNAQRF
NVDVSRFPTI AKIHATCMEL DAFQKAAPGA QPDSE