Gene Rmet_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0258 
Symbol 
ID4037044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp275788 
End bp276627 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content69% 
IMG OID637975631 
Productamidophosphoribosyltransferases-like protein 
Protein accessionYP_582413 
Protein GI94309203 
COG category[R] General function prediction only 
COG ID[COG1040] Predicted amidophosphoribosyltransferases 
TIGRFAM ID[TIGR00201] comF family protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGGAC ACGGAGAGAC GGAACGGAAT CAGTGGAATC GGCGGGCGGC GCAACAGCGT 
GTCGCACCTC GGCATGGGCC GGACCCGGAT GGCCGGCCAA CAGGGACTGG AGTATACGCG
CCCTCTTCGC AGCTCGCCGG GCGTGCCGGC GGGATCACCG GGCTCTGGTC AGCCCTGCTG
CCGTCGGTTT GCCTGATCTG CGCGAAGGTC CAGCGCGACG TGGTCTGCGC GGGTTGCGCC
GACACGCTGT TGAGAATCGT TCCACGCTGC CCGCGTTGCG CGATGCCCGG CACCATACCC
GGTGTGAAAG CGGGCCGATG TGACGCCTGC GCTGACGACG ACCCCATCGA CGCCACATTG
ACGCTGGGCA ACTACATCAC GCCAGCCGAT CGACTGGTTT TGCGCCTGAA GTTTGCCGCG
CGCCTCCCCG CCGCCGCATG GATCGCCCGG CAAATGGCGA CCCGGATGCA AGCGGCGGGT
ATCGCGCCCG ATGTTCTGGC GCCGATTCCT CTTGCGCCAC AACGGCTGGC GGGCCGCGGC
TTCAACCAGG CGTGGGAAAT CGCGCGGCCG CTGGGCAGGC AGCTTGGCAT CGCGGTCTCG
GCAACATTGC TGACCCGCCG GCGCGACACG GTCAGCCAGC GTGTGCTCGA CCAGTCGGCA
CGGCAGGCGA ATCTGCGGGA TGCGTTCGTG CTGGACCCGC CCTGCCGGCT AGACGGACTG
CATATCGGAC TGGTCGACGA TGTGATGACC ACTGGCGCCA CGCTACGTGA GGCGGCACGG
GTGCTCAAGG CGCATGGCGC CGCGCGGGTG ACGGCGCTGC CGGCACTGCG CACGCCGTGA
 
Protein sequence
MQGHGETERN QWNRRAAQQR VAPRHGPDPD GRPTGTGVYA PSSQLAGRAG GITGLWSALL 
PSVCLICAKV QRDVVCAGCA DTLLRIVPRC PRCAMPGTIP GVKAGRCDAC ADDDPIDATL
TLGNYITPAD RLVLRLKFAA RLPAAAWIAR QMATRMQAAG IAPDVLAPIP LAPQRLAGRG
FNQAWEIARP LGRQLGIAVS ATLLTRRRDT VSQRVLDQSA RQANLRDAFV LDPPCRLDGL
HIGLVDDVMT TGATLREAAR VLKAHGAARV TALPALRTP