Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0253 |
Symbol | |
ID | 4037039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 270722 |
End bp | 272437 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637975626 |
Product | RNA-directed DNA polymerase |
Protein accession | YP_582408 |
Protein GI | 94309198 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCAT TGATCCGCGA GGATGAATCT GCGCCCTCCG GCATTCCGCA GCGATGGGGC GACATCAATT GGCGCCGCGT CGAACAGAAT GTTCGAGCAA TGCAGATTCG AATTGCGAAG GCGACACAGG AACGGGACTG GCGCAGGGTG AAAGCTCTGC AGCGGTCTCT GACCCGCTCG TTTTCCGCCA AGGCATCGGC GGTGCGACGA GTGACGGAGA ACCAAGGTAA ACGGACGGCA GGTGTCGACC GCGAACTCTG GGACTCGCCT GAAGTTCGAT GGGTAGCCAT TGGACGGTTG AGACGCCGGG GGTATCGGCC CATGCCATTA CGGAGGGTCT TCATCCCCAA AGCCAACGGA AAGGAACGCC CTCTGGGTAT CCCGACCATG TTGGACCGGG CCATGCAGGC GCTATATCTG CTGGCGCTGG AACCGGTGTC CGAGGGGACG AGCGATCCGA ACTCTTATGG GTTCAGGTCC AATCGTTCTA CTGCGGATGC TATGTCCCAG CTATTCGTCA ACTTATCCAG AAAGGTCTCG GCCTCATGGA TATTGGAGGC GGACATCCGC GGGTGTTTTG ACCATATCAG TCACGACTGG CTGGAGCGCA ATGTCCCTAT GGACAAAGCG ATCCTTCGGA AGTGGTTGAA AGCTGGCGTG GTATTTCAGG GCCAGTTTCA GGCGACCGAA GCCGGTACGC CACAGGGGGG CATCATCTCC CCGACCTTAG CCAATGTGGC GCTGAACGGA CTGGAACAAC AGCTAGCTCG GTTTCTCGAA ACCACGCTGG GTGTCAACCA GACCCGGAAG CTCAAAGTAA ATGTTGTGCG CTATGCGGAC GATTTCGTGA TCACCGGCAG CACGCCGGAA GTTTTGGAAC ACGAGGTGAA GCCGTGGGTG GAACAGTTCC TCGCAATTCG AGGGTTGTCC CTGTCCACGG AGAAAACGCG GATCGTGAGC ATTGACGAGG GTTTTGACTT CCTTGGGTGG AATTTCCGGA AGTATTCCGG AACGCTGCTC ATTAAGCCAA GCAGGAAAAA CGCGCAGGCG TTCTATCGCA AGGTTAAGGA GGTTATCAGT GCTAACAAGA CGGTAAAGCA GGAGGTCATC ATTCGCCTGC TGAACCCGAT GCTGAGAGGC TGGGCGCAGT ATCACAGCCC GGTAGTGGCA AAAGAAGCGT TCAGCAAGAT GCAGAGCCGA GTTTTCCGGG CGCTGCTTTG GTGGACAAAA CGGCGACACA GAGGGAAGAA CGCCGAATGG GTGCGGAAGA AATACTTCGC TTCGTTTGGT GATCGAAACT GGGTGTTCGG GACTGAGTTT GTGGAAGACG ATGGGGAACG GCGCTGGCAG GAGTTGTATT CGCTTGCTAG CACGCCCATC AGACGGCACA AGAAGATTCG GGGGGACTTC AATCCTTTCG ATCCAGCGCA AGAGATGTAT GGCGAAAATC TACGCCGGGA CCGCATGCTG GAAAGCATGT CTCACCGGAA ACAGTGGATC AGGCTATATG TCGATCAGCG GGGCTTATGC GCGGTGTGTC AGTGCAAGAT AACCAAAGAG ACCGGGTGGG ATGACCATCA CATCGTCTAC AGAACCCACG GAGGTTCAGA CGCTCTAGGA AATCGCGTAT TGCTGCATCC CAACTGCCAC GTCCAAGTAC ACCATCATGG TCGAACCGTT GTGAAACCGG TGCTGGAGAT GTCCAGCATT TTGTAA
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Protein sequence | MEALIREDES APSGIPQRWG DINWRRVEQN VRAMQIRIAK ATQERDWRRV KALQRSLTRS FSAKASAVRR VTENQGKRTA GVDRELWDSP EVRWVAIGRL RRRGYRPMPL RRVFIPKANG KERPLGIPTM LDRAMQALYL LALEPVSEGT SDPNSYGFRS NRSTADAMSQ LFVNLSRKVS ASWILEADIR GCFDHISHDW LERNVPMDKA ILRKWLKAGV VFQGQFQATE AGTPQGGIIS PTLANVALNG LEQQLARFLE TTLGVNQTRK LKVNVVRYAD DFVITGSTPE VLEHEVKPWV EQFLAIRGLS LSTEKTRIVS IDEGFDFLGW NFRKYSGTLL IKPSRKNAQA FYRKVKEVIS ANKTVKQEVI IRLLNPMLRG WAQYHSPVVA KEAFSKMQSR VFRALLWWTK RRHRGKNAEW VRKKYFASFG DRNWVFGTEF VEDDGERRWQ ELYSLASTPI RRHKKIRGDF NPFDPAQEMY GENLRRDRML ESMSHRKQWI RLYVDQRGLC AVCQCKITKE TGWDDHHIVY RTHGGSDALG NRVLLHPNCH VQVHHHGRTV VKPVLEMSSI L
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