Gene Rmet_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0236 
Symbol 
ID4037022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp252302 
End bp252946 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content63% 
IMG OID637975609 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_582391 
Protein GI94309181 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTGGG AAGTCTGGCT GGCCTATTTT GCCGCGTGCT GGGTGATCGC TGTCTCGCCC 
GGTTCGGGCG CCGTGCTGTC GATGAGCCAC GGCCTGTCAT ACGGCCTGAA GAAGACGTCG
ACGACGATTC TGGGCCTGCA GACCGGCCTG GTGATCATCC TGCTGATCGC AGGCGGTGGA
CTTGGCGCAC TGCTGCTGGC GTCCGAAGAA GCATTCCTGG TGGTCAAGAC GATTGGCGCG
ATGTATCTGA TCTACCTGGG TATCCAGCAG TGGCGTGCCA AGGTTGAGAC GAACCCGCAG
AACAGCGAGG ACAAGACGGT GCGCGTGACC ATCATGAGCC GGCGCCGGCG CTTCGCCACG
GGGCTGCTGA CGAACGTCAC CAACCCCAAG GGCATCATCT TCATGGTGGC CGTGCTGCCG
CAGTTCATCG ACCCGACGCA TGCGCTCGGG CTGCAACTGG CTATCCTGGC GGCGACGATG
TGCTTTGTGG ACCTGATCGT GATGCACGGC TATGCGCTAC TGGCGTCGCG CATGCAGGGC
CTGTTCCGCA ACGCGCGTGC CGTGCGCTGG CAAAACCGCT TCTTCGGCAG CGTGCTGGTG
GCCGTGGGCA CCGCGCTGTT CTTTGTCCGG CGTCATCACG CCTGA
 
Protein sequence
MRWEVWLAYF AACWVIAVSP GSGAVLSMSH GLSYGLKKTS TTILGLQTGL VIILLIAGGG 
LGALLLASEE AFLVVKTIGA MYLIYLGIQQ WRAKVETNPQ NSEDKTVRVT IMSRRRRFAT
GLLTNVTNPK GIIFMVAVLP QFIDPTHALG LQLAILAATM CFVDLIVMHG YALLASRMQG
LFRNARAVRW QNRFFGSVLV AVGTALFFVR RHHA