| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0230 |
|---|
| Symbol | |
|---|
| ID | 4037016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 245002 |
|---|
| End bp | 246336 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637975603 |
|---|
| Product | Fis family transcriptional regulator |
|---|
| Protein accession | YP_582385 |
|---|
| Protein GI | 94309175 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCGA TGCAGGACGG ATTGCGTGTG CTGTTCGTCG AGGACGAACC ACTGGTGCGT
CAGGCGACGG CGCAGAGCCT GGAACTGGCT GGCTTCTCGG TGCTGGCGCT GCCTTCGGCC
GAAGCGGCGA TGCCGCATCT TGGCGCGGAT TTTCCCGGGG TGCTGGTTAC CGATGTGCGC
CTGTCCGGCG CGAGCGGGCT GGATCTGCTG CAGCACTGCC GCAATGCCGC GCCGGGCGTG
CCGGTGATCC TGGTCACGGG GCACGGCGAT ATCACGATGG CGGTGCAGGC GATGCGCGAG
GGCGCCTATG ACTTCATCGA GAAGCCGTTC GGCGCGGATC GTCTGACCGA AACGGTGCGC
CGTGCGCTCG AGCGCCGCGC GCTCGAGCTG GAGAACCACG CGCTGCGCCG CGAGCTGGCT
GGCCCGGCTG CCGGCACGCG GATCATCGGC CGGTCGCCGG CGATCGCGCA GGTGCGCGAC
CTGATCGCCA ATGTGGCGGC TACCGATGTG CCGGTGATGA TCAACGGCGA GACCGGTACG
GGCAAGGAAC TCGTGGCGCG GAGCCTGCAC GCGCTCTCCA CGCGGCGTGA CCAACCCTTC
ATCGCGCTGA ACTGTGGTGC CGTGCCAGAG TCGATTTTCG AGAGCGAGAT GTTCGGCCAC
GAGGCCGGCG CATTTACCGG CGCGGGCAAG CGGCGCGTGG GCAAGCTCGA ACATGCGTCG
GGTGGCACCC TGTTCCTCGA CGAGATCGAG AGCATGCCGC TGGCCTTGCA GGTGAAGCTG
CTGCGCGTGC TGCAGGAGGG CACGCTGGAG CGGCTCGGCT CGAATACGTC GATACCCATC
GACGTGCGCA TCATCGCGGC TTCGAAGGGC GACATGGAAG CACTGGTGGC GCAAGGTACG
TTCCGGCAGG ATCTGCTGTA CCGGCTCAAC GTGGTGACGA TTCCGCTACC GCCGCTGCGC
GAGCGGCGCG AGGACATCGT GCCGCTGTTC GAGCACTTCA TGCTCGTTGC CGCCGTGCGC
TATCAGCGGC CGGCGCCGAT TCTGTCCGAG ATGCAGCGCC AGCAACTGAT GCAACGGCCC
TGGCCCGGCA ATGTGCGGGA ACTGCGCAAC GCGGCAGATC GACTGGTGCT GGGCGTGCCG
GAAGGCGGGC ACGCCGGCGG CAAGGCGGAT CCCGTTGACG AATCGACGCC GCTGCGCGAG
CGGATGGAGC GCTACGAGCG CGCCGTGATC GCCGATACGC TGGCCCGCAC GGGCGGTGCG
GTCAGCCAGG CAGCGGACCT GCTGCAAGTG GGCAAGGCGA CGCTTTACGA CAAGATCAAA
CGCTACGGAC TGTAA
|
|---|
| Protein sequence | MIAMQDGLRV LFVEDEPLVR QATAQSLELA GFSVLALPSA EAAMPHLGAD FPGVLVTDVR
LSGASGLDLL QHCRNAAPGV PVILVTGHGD ITMAVQAMRE GAYDFIEKPF GADRLTETVR
RALERRALEL ENHALRRELA GPAAGTRIIG RSPAIAQVRD LIANVAATDV PVMINGETGT
GKELVARSLH ALSTRRDQPF IALNCGAVPE SIFESEMFGH EAGAFTGAGK RRVGKLEHAS
GGTLFLDEIE SMPLALQVKL LRVLQEGTLE RLGSNTSIPI DVRIIAASKG DMEALVAQGT
FRQDLLYRLN VVTIPLPPLR ERREDIVPLF EHFMLVAAVR YQRPAPILSE MQRQQLMQRP
WPGNVRELRN AADRLVLGVP EGGHAGGKAD PVDESTPLRE RMERYERAVI ADTLARTGGA
VSQAADLLQV GKATLYDKIK RYGL
|
|---|
| |