Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0229 |
Symbol | |
ID | 4037015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 242959 |
End bp | 244965 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637975602 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_582384 |
Protein GI | 94309174 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.930854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCATT CCGACGACTT CCTTGCCGTG CATGACCCTG CCGCGCCCGG CCCGGTGCAC GCGCCGGAGT CGAGCACGCG CTGGTGGGGG TTTGCCGCCG CGCTGATGGT GGGGCTCCTG GCGCTGTGCT CGCTGACCTG GCTGTTTTCG GTCCAGCGCG GCATCGCCGC ATTGCAGCAG TCCACGGCCA TGCGTGCCGA CCGTTATGCG GCCACGCTTG AATCGACGCT GGACCGCTAC GAATTCCTTC CCGCGCTGGT ATCGCTGCAC CCTTCGGTGC GCGCGCTGCT GGCCAATCCT GAAGACCCGG CCCGTATTGC CGTGGCCAAC AACTACCTGG CCGAGGTCAA TACCCGGGCC CGCGCGTCGG CCACCTACGT CATCGCGGCC AGCGGGCTGG CACTGGCCGC CAGCAATCAT GGCGAGCCGG GCAGCTTCGT CGGTACCGAC TACCGTTTCC GCCCGTACTT CCAGATGGCA TCGCGCGGTC AGATTGGCCG CTTCTACGCG ATCGGCATCA CCAGCGACGA GCCTGGCTAC TACATCGCCC AGCCGATCGA GTCGGGCGGC AAGGTCATCG GCGTGACGGT GGTGAAGCTG AACCTCGAAT GGTTCCAGCG CGCGGGCTCC GGTAGCACCG AGCCACTGAT GGTGTCCGAC GACCACGGCG TGATCTTCCT GTCGTCGGTG CCGGGCTGGC AGTACCGCAC GCTTCGGCCC CTGCCGCCCA CGCTTCAGGC CGAACTGCAC AACACGCGTC AGTATCATGA CGTCGATGTC ACGCCGCTGC CGATCCAGCC GCTGGATTCC CCGGTCTCGC GCTGGCTGGC CAGCACCACG CTCAACGATG GCGAACGGCT GGTGAGAGTT GGCGCCGCGG GCAGCACGGG GGCCACGGCA CGAGATGGCG ATGACGGTCA AGGCGCGCAC TTCGGTCTGT CCAGCGATGG CGCGGACCGC TACCTGGAAA TCAATCGCGC CGTCGGGCCC GCCGGCTGGA ACATGCAGGT GATGGCGCAA CTGGACCCGG TGCTGGCCAG TGCGCGCACC GCGACGATTG GCGCGGCGCT GGCCTATGCG TGCATCTGCC TGCTGCTGGT GAACCTGCGC CAGCGCCGCC AGCGCGCGCG TGACATGCAA TACAGCCGCC GGCTGCTGGA AGCGGCCTAC GATCAACTGG AACGGCGCGT GGAGGCCCGT ACGGCCGACC TGATGGCGAT CAACGAGCAA CTCGAAGCCG AAGTGACCGA GCGCGCGCGG ACCGAAGGCG AACTGCGCGC GACGCAGGAT GAACTGGTGC AGGCCAGCAA GCTGGCGGCG CTGGGGCAGA TGGCAGCCGG CATCACCCAT GAACTGAACC AGCCGCTGGC GGCCCTGCGC ACGTTCTCGG ACAACACGCG CGTGTTGCTG GAGCGCGGCC AGCTCGATGC AGCCACCGGC AATCTCTCCG CCATCGCTGA TCTGACCGAG CGGATGGGCA AGATCACGGG CCAGCTCAAG CTGTTCGCGG GCAAGGCGCG TCAGCGCCGC AATGCCGTGC GCGTGCGCGC CGCCATCGAC CATGTGCTGC AACTGATCGC GCCACGGCTG GGTCGGGTGA TGCTACGGGT GCGGGGGCTC GATGGCGACG CTGCGGACCT GGCCGTATGG GCCGACGAAC TCAAGCTCGA GCAGGTGCTG CTGAATCTCG TCGGCAATGC GCTCGATGCC ATTGCAGCGG CCGGCGCCGA GGATGGCCGC GTCGATATCG CCGTCAGCGC GACAGACGAG ACCGTGACGC TGGTCGTGCG CGACAATGGA CCCGGCATCG CGCCGGACGC GCTGCCACGG CTGTTCGAGC CGTTCTTCAC GACCAAGGAG ATCGGTCAGG GGCTCGGCCT GGGGCTGGCG ATTTCGTCGT CGATCGTGCG CGAGTTCGGC GGGCAACTGA CGGCCGGCAA TGTCGAGGGC GGCGGCGCGG AATTCGTCGT GACACTGCGA CGCTCGCGCC AGACGGCCAC GGCGTGA
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Protein sequence | MPHSDDFLAV HDPAAPGPVH APESSTRWWG FAAALMVGLL ALCSLTWLFS VQRGIAALQQ STAMRADRYA ATLESTLDRY EFLPALVSLH PSVRALLANP EDPARIAVAN NYLAEVNTRA RASATYVIAA SGLALAASNH GEPGSFVGTD YRFRPYFQMA SRGQIGRFYA IGITSDEPGY YIAQPIESGG KVIGVTVVKL NLEWFQRAGS GSTEPLMVSD DHGVIFLSSV PGWQYRTLRP LPPTLQAELH NTRQYHDVDV TPLPIQPLDS PVSRWLASTT LNDGERLVRV GAAGSTGATA RDGDDGQGAH FGLSSDGADR YLEINRAVGP AGWNMQVMAQ LDPVLASART ATIGAALAYA CICLLLVNLR QRRQRARDMQ YSRRLLEAAY DQLERRVEAR TADLMAINEQ LEAEVTERAR TEGELRATQD ELVQASKLAA LGQMAAGITH ELNQPLAALR TFSDNTRVLL ERGQLDAATG NLSAIADLTE RMGKITGQLK LFAGKARQRR NAVRVRAAID HVLQLIAPRL GRVMLRVRGL DGDAADLAVW ADELKLEQVL LNLVGNALDA IAAAGAEDGR VDIAVSATDE TVTLVVRDNG PGIAPDALPR LFEPFFTTKE IGQGLGLGLA ISSSIVREFG GQLTAGNVEG GGAEFVVTLR RSRQTATA
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