| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0225 |
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| Symbol | |
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| ID | 4037011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 238765 |
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| End bp | 239958 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637975598 |
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| Product | penicillin-binding protein 6 |
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| Protein accession | YP_582380 |
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| Protein GI | 94309170 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACA GAGTCACGCC GTACGTCGCA TCCGCCATTG CTCCCGTAAT CGTTGCGGCA
ACGCTCGCCG CCGCGCCCGC AGCCGTGATG GCGCAAGGCG TGCCGGTGCC ACAGGTCGCC
GCCAAGTCCT GGATGCTGTA CGACGTGACG AGCGGCCAGG CGCTGGCGTC ACAGAATGCA
GATATGCGCA TCGAGCCGGC GTCGCTGACC AAGCTGATGA CGGCTTACCT GGCCTTCGAG
GCGCTCAAGG AAAAACGCCT GACGCTGGAT CAGACCGTCA CGCCGACCGA CATCGTCCGC
AAGGTGAAAA GCGATGAATC GCGCATGTTC ATCGAAGCCG GCAAGCCGGT CAGCGTGCAG
GACCTTCTGC TGGGCCTGAT CGTCCAGTCG GGCAACGACG CCTCGCTGGC GCTGGCCGAA
GCCGTGGGCG GCTCGGAAGA AGGCTTCGTC GTGATGATGA ACCGTGAAGC CCAGCGCATG
GGCATGAAGA ACACGCACTT CACGAACACC GACGGTGTGC CCGATCCGAA CCACTACACC
ACGGCGGTGG ACCTGGCGAT CCTGACCACG CGCCTGATCA AGGACTTTCC CGAGTACTAC
TCGATGTACT CGCAGAAGGA GTTCACCTAT AACAAGATCA GGCAGCCGAA CCGCAACCGT
CTGCTGTACA TCGACCCGAC CGTGGACGGC GTGAAGACCG GCCATACGAA GTCCGCGGGC
TACTGCCTGA TTTCGTCGGC AAAGCGTCCG CTGGCCAATG TGCCCAACGG CTCGCGCCGA
CTGGTGTCGA TCGTGATCGG CACGGCCACC GAGCAGATCC GCACACAGGA AAGCCTGAAG
ATCCTGAACT ACGGCTTCCA GTTCTTCGAC ACGCTGCGCC TGTACGACAA GGGCCAGGTG
CTGGCCACGC CCGACATCTA CAAGGGCAAG ACCGGCACGA TCAAGATCGG CGTGGCCAAC
GAGACGTTCG TCACGGTGCC CAAGGGCACG GGCTCGCGCC TCAAGCCGGT GCTGGAGCGC
CAGGAACTGC TGATCGCGCC GATCACGGCC GGCCAGCAGG TGGGCACCGT CAAGCTGATG
GACGGCGCCA ACAAGGTGGC GGAATTCCCG GTGGTGGCGC TCGAGGAAGT GCCGGAGGCC
GGCTTCTTCG GCCGCCTGTG GGATACGATC CGCCTCTGGT TCAAGCGCAA GTAA
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| Protein sequence | MLNRVTPYVA SAIAPVIVAA TLAAAPAAVM AQGVPVPQVA AKSWMLYDVT SGQALASQNA
DMRIEPASLT KLMTAYLAFE ALKEKRLTLD QTVTPTDIVR KVKSDESRMF IEAGKPVSVQ
DLLLGLIVQS GNDASLALAE AVGGSEEGFV VMMNREAQRM GMKNTHFTNT DGVPDPNHYT
TAVDLAILTT RLIKDFPEYY SMYSQKEFTY NKIRQPNRNR LLYIDPTVDG VKTGHTKSAG
YCLISSAKRP LANVPNGSRR LVSIVIGTAT EQIRTQESLK ILNYGFQFFD TLRLYDKGQV
LATPDIYKGK TGTIKIGVAN ETFVTVPKGT GSRLKPVLER QELLIAPITA GQQVGTVKLM
DGANKVAEFP VVALEEVPEA GFFGRLWDTI RLWFKRK
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