| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0222 |
|---|
| Symbol | |
|---|
| ID | 4037008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 235860 |
|---|
| End bp | 236837 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637975595 |
|---|
| Product | 2-nitropropane dioxygenase, NPD |
|---|
| Protein accession | YP_582377 |
|---|
| Protein GI | 94309167 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCCG CCAAGCTTAT TCCGCCAGTG CTGCAAAACC TGGCCCTGCC CGTTATCGCG
TCGCCAATGT TCATCGTCAG CTATCCGGAA CTGGTGCTGG CGCAGTGCAA GGCCGGCATC
GTCGGCTCGT TCCCCGCGCT AAACGCGCGC CCCGCCGAAC TGCTCGATGA ATGGCTGACC
CAGATCCAAG CGGAACTGGC CAACTTCAAG GCGGCGAATC CCGGCAAGCC GGTGGGCCCG
ATCGCGGTCA ACCAGATCGT GCACGCCTCC AACGCGCGCC TCGAGCATGA CGTGAAGGTC
TGCGTCGAAC ACAAGGTGCC GATCTTCATC ACGTCGCTGC GCGCGCCGCC CAAGGAAATG
ATCGACGCCG TGCACAGCTA CGGCGGCATC GTGCTGCACG ACGTCATCAA CATTCGCCAC
GCTGAAAAAG CGATCGAGGC CGGCGTTGAC GGCCTGATCC TGGTGGCGGC CGGTGCAGGC
GGCCATGCCG GCACGCTATC GCCGTTCGCG CTGGTGGGCG AAGTGCGCAA GTTCTTCGAC
GGCCCGATCG CGCTGTCCGG CTCCATCGCC ACCGGTGAAG CCGTGCTGGC CGCGCAGGCC
ATGGGCGCGG ATTTCGCCTA CGTGGGCACA CGCTTCATCG CATCGCAAGA GGCGCACGCA
GCGCTCGAGT ACAAGCAGTC GATCACCAGT TCGGCCGCGT CGGACATCAT CTACACGAAC
CTGTTCACGG GTGTGCACGG CAACTACATC CGCGAGAGCA TCGTCAATTC GGGGCTCGAT
CCGGAGAACC TGCCCGTGGC CGACAAGAGC AAGATGGACT TCTCCAGCGG CAGTTCGAAG
GCCAAGGCAT GGAAGGACAT CTGGGGCGCC GGTCAGGGCG TGGGCCAGAT CGAAGACATC
CCCACCGCCG GTGAGATCGT GGCACGCATG AAGAGCGAGT ACGACGCCGC GCGTGCCCGC
CTGGGGCTGG TAGCATAA
|
|---|
| Protein sequence | MPAAKLIPPV LQNLALPVIA SPMFIVSYPE LVLAQCKAGI VGSFPALNAR PAELLDEWLT
QIQAELANFK AANPGKPVGP IAVNQIVHAS NARLEHDVKV CVEHKVPIFI TSLRAPPKEM
IDAVHSYGGI VLHDVINIRH AEKAIEAGVD GLILVAAGAG GHAGTLSPFA LVGEVRKFFD
GPIALSGSIA TGEAVLAAQA MGADFAYVGT RFIASQEAHA ALEYKQSITS SAASDIIYTN
LFTGVHGNYI RESIVNSGLD PENLPVADKS KMDFSSGSSK AKAWKDIWGA GQGVGQIEDI
PTAGEIVARM KSEYDAARAR LGLVA
|
|---|
| |