Gene Rmet_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0219 
Symbol 
ID4037005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp233224 
End bp234039 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content63% 
IMG OID637975592 
ProductABC transporter-related protein 
Protein accessionYP_582374 
Protein GI94309164 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTC TATCCGTCAA CAACATCGAA GTCATCTACG ACCACGTGAT CCTCGTGCTC 
AAGGGCGTGT CGCTCGAAGT GCCTGAGGGT CGCATCGTGG CGTTGCTGGG CGCCAATGGC
GCGGGCAAGA CCACCACGCT CAAGGCGATC TCGAATCTGC TGCATGCGGA GCGTGGCGAT
GTCACCAAGG GCTCGATCGA ATATCGCGGG CAGCGCGTGG ACCAGCTCAC GCCAAACGAT
CTGGTCAAGC GCGGCGTGAT CCAGGTCATG GAGGGGCGCC ACTGCTTCGC GCACCTGACG
ATCGAGGAAA ACCTGCTGAC GGGCGCCTAT ACCCGCGGGC TGTCGCGCGG CCAGACACGC
GATGAACTTG AGAAGATCTA CGCGTACTTT CCGCGCCTGA AGACGCGCCG CAAATCGCAG
GCAGGCTATA CGTCCGGCGG CGAGCAGCAG ATGTGCGCGA TCGGGCGGGC CATGATGGCC
AAGCCGGCGA TGATCCTGCT CGACGAGCCG TCGATGGGCC TGGCGCCGCA GATCGTCGAG
GAGATCTTCG AGATCGTGCG TGACCTGAAT ACCCGCGAGC GCGTCAGCTT TCTGCTGGCC
GAGCAGAACA CGATGGTGGC GCTGCGCCAT GCCGACTACG GTTACATCCT CGAAAACGGC
CGCGTGGTGA TGGATGGCGA TGCGGAATCG CTGCGCACCA ACGAGGACGT CAAGGAGTTC
TACCTGGGCG TGGCCGCCAA CGATGCGGAT GGTGCCGCGC GCAAGTCGTT CCGCGATGTG
AAGAGCTACC GCCGCCGCAA GCGCTGGCTG GCGTGA
 
Protein sequence
MTLLSVNNIE VIYDHVILVL KGVSLEVPEG RIVALLGANG AGKTTTLKAI SNLLHAERGD 
VTKGSIEYRG QRVDQLTPND LVKRGVIQVM EGRHCFAHLT IEENLLTGAY TRGLSRGQTR
DELEKIYAYF PRLKTRRKSQ AGYTSGGEQQ MCAIGRAMMA KPAMILLDEP SMGLAPQIVE
EIFEIVRDLN TRERVSFLLA EQNTMVALRH ADYGYILENG RVVMDGDAES LRTNEDVKEF
YLGVAANDAD GAARKSFRDV KSYRRRKRWL A